Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10075

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
2,273,075	+				+0.0
2,273,075	+				+0.4
2,273,075	+				-0.2
2,273,275	+		AO356_10070	0.36	+0.0
2,273,349	+		AO356_10070	0.52	+0.1
2,273,350	-		AO356_10070	0.53	+0.5
2,273,350	-		AO356_10070	0.53	-0.2
2,273,350	-		AO356_10070	0.53	+0.2
2,273,377	+		AO356_10070	0.59	-0.9
2,273,378	-		AO356_10070	0.59	-0.5
2,273,458	+		AO356_10070	0.76	-0.5
2,273,458	+		AO356_10070	0.76	-0.0
2,273,458	+		AO356_10070	0.76	-0.4
2,273,458	+		AO356_10070	0.76	-0.3
2,273,458	+		AO356_10070	0.76	-0.0
2,273,459	-		AO356_10070	0.77	+0.5
2,273,459	-		AO356_10070	0.77	-0.1
2,273,468	-		AO356_10070	0.79	+0.1
2,273,548	+				-1.0
2,273,548	+				+0.2
2,273,548	+				+0.2
2,273,548	+				-0.3
2,273,548	+				+1.3
2,273,548	+				+0.5
2,273,549	-				+0.6
2,273,549	-				+0.9
2,273,549	-				+0.9
2,273,549	-				-0.3
2,273,549	-				-0.5
2,273,549	-				+0.5
2,273,549	-				+0.4
2,273,549	-				-0.1
2,273,549	-				+0.5
2,273,549	-				-0.8
2,273,549	-				-1.1
2,273,549	-				+0.4
2,273,549	-				+0.4
2,273,591	+				+0.3
2,273,717	+				+0.3
2,273,784	+				-1.6
2,273,785	-				-1.1
2,273,785	-				-0.9
2,273,810	+		AO356_10075	0.11	-1.0
2,274,082	+		AO356_10075	0.44	-0.3
2,274,082	+		AO356_10075	0.44	+0.7
2,274,082	+		AO356_10075	0.44	-1.3
2,274,082	+		AO356_10075	0.44	-1.6
2,274,082	+		AO356_10075	0.44	-0.1
2,274,082	+		AO356_10075	0.44	-0.6
2,274,082	+		AO356_10075	0.44	-0.6
2,274,082	+		AO356_10075	0.44	-2.1
2,274,082	+		AO356_10075	0.44	-1.5
2,274,083	-		AO356_10075	0.44	-1.4
2,274,083	-		AO356_10075	0.44	-1.8
2,274,083	-		AO356_10075	0.44	-0.6
2,274,083	-		AO356_10075	0.44	-0.1
2,274,083	-		AO356_10075	0.44	-2.1
2,274,083	-		AO356_10075	0.44	-1.2
2,274,099	+		AO356_10075	0.46	-1.7
2,274,100	-		AO356_10075	0.46	-0.7
2,274,158	+		AO356_10075	0.53	-0.7
2,274,159	-		AO356_10075	0.54	-1.0
2,274,225	+		AO356_10075	0.61	-2.2
2,274,586	+				-1.7
2,274,586	+				-0.1
2,274,586	+				-1.8
2,274,587	-				-0.1
2,274,587	-				-0.2
2,274,709	+		AO356_10080	0.30	-2.1
2,274,751	+		AO356_10080	0.37	-0.9
2,274,751	+		AO356_10080	0.37	-0.1
2,274,751	+		AO356_10080	0.37	-0.2
2,274,752	-		AO356_10080	0.37	+0.7
2,274,752	-		AO356_10080	0.37	+0.6
2,274,889	+		AO356_10080	0.62	-0.4
2,274,889	+		AO356_10080	0.62	-1.7
2,274,889	+		AO356_10080	0.62	-0.4
2,274,889	+		AO356_10080	0.62	-0.6
2,274,910	+		AO356_10080	0.65	-0.8
2,274,911	-		AO356_10080	0.65	+0.1
2,274,911	-		AO356_10080	0.65	-0.6
2,274,911	-		AO356_10080	0.65	+0.3
2,274,911	-		AO356_10080	0.65	+1.3
2,274,911	-		AO356_10080	0.65	+0.5
2,274,911	-		AO356_10080	0.65	+0.4
2,275,000	+		AO356_10080	0.81	-0.6
2,275,000	+		AO356_10080	0.81	-0.8
2,275,000	+		AO356_10080	0.81	+0.1
2,275,000	+		AO356_10080	0.81	-0.5
2,275,000	+		AO356_10080	0.81	-1.1
2,275,000	+		AO356_10080	0.81	-1.0
2,275,000	+		AO356_10080	0.81	-1.0
2,275,000	+		AO356_10080	0.81	-0.6
2,275,000	+		AO356_10080	0.81	-0.5
2,275,001	-		AO356_10080	0.81	-0.3
2,275,001	-		AO356_10080	0.81	+0.6
2,275,001	-		AO356_10080	0.81	-0.9
2,275,001	-		AO356_10080	0.81	-0.3
2,275,001	-		AO356_10080	0.81	+0.3
2,275,001	-		AO356_10080	0.81	+0.1
2,275,001	-		AO356_10080	0.81	+0.6
2,275,001	-		AO356_10080	0.81	+0.1
2,275,001	-		AO356_10080	0.81	+0.5
2,275,001	-		AO356_10080	0.81	+0.0
2,275,004	+		AO356_10080	0.82	-0.0
2,275,004	+		AO356_10080	0.82	-0.9
2,275,005	-		AO356_10080	0.82	+1.2
2,275,005	-		AO356_10080	0.82	-1.3
2,275,005	-		AO356_10080	0.82	+0.4
2,275,086	+				-0.5
2,275,087	-				+1.0
2,275,087	-				+0.6
2,275,087	-				+0.4
2,275,087	-				-0.4
2,275,087	-				+0.2
2,275,106	+				-1.0
2,275,106	+				-0.5
2,275,107	-				+0.1
2,275,107	-				+0.6
2,275,133	+				-0.8
2,275,134	-				-0.1
2,275,134	-				-0.4
2,275,136	+				+0.0
2,275,136	+				+0.4
2,275,136	+				-2.1
2,275,136	+				-1.0
2,275,136	+				+0.2
2,275,136	+				-0.3
2,275,136	+				-0.7
2,275,136	+				+0.2
2,275,137	-				-0.2
2,275,137	-				+1.1
2,275,137	-				-0.3
2,275,137	-				-0.1
2,275,137	-				+0.8
2,275,137	-				-1.6
2,275,137	-				+0.8
2,275,137	-				+0.6
2,275,137	-				-0.4
2,275,137	-				-0.4
2,275,137	-				-0.2
2,275,137	-				-0.2
2,275,137	-				-0.4
2,275,138	+				-0.3
2,275,138	+				+0.9
2,275,139	-				+0.3
2,275,148	-				+0.2
2,275,194	+				+1.2
2,275,195	-				+1.0
2,275,225	-				+0.6
2,275,232	+				-0.2
2,275,232	+				+0.3
2,275,233	-				-0.4
2,275,233	-				+0.6
2,275,233	-				+0.4
2,275,233	-				-0.9
2,275,267	+		AO356_10085	0.11	-0.1
2,275,267	+		AO356_10085	0.11	+0.1
2,275,267	+		AO356_10085	0.11	-0.4
2,275,268	-		AO356_10085	0.11	-0.2
2,275,268	-		AO356_10085	0.11	-0.2
2,275,268	-		AO356_10085	0.11	-0.2
2,275,268	-		AO356_10085	0.11	+0.8
2,275,268	-		AO356_10085	0.11	+1.0
2,275,268	-		AO356_10085	0.11	+0.1
2,275,393	+		AO356_10085	0.30	-1.0
2,275,393	+		AO356_10085	0.30	-0.5
2,275,394	-		AO356_10085	0.30	+0.7
2,275,394	-		AO356_10085	0.30	-0.0
2,275,489	-		AO356_10085	0.44	+0.2
2,275,489	-		AO356_10085	0.44	+0.2
2,275,529	+		AO356_10085	0.50	+0.1
2,275,529	+		AO356_10085	0.50	+0.8
2,275,529	+		AO356_10085	0.50	+0.5
2,275,529	+		AO356_10085	0.50	+0.4
2,275,530	-		AO356_10085	0.51	-0.1
2,275,530	-		AO356_10085	0.51	+1.3