Experiment: periodate 0.00125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_801 and Pf6N2E2_802 are separated by 342 nucleotides Pf6N2E2_802 and Pf6N2E2_803 are separated by 386 nucleotides Pf6N2E2_803 and Pf6N2E2_804 are separated by 99 nucleotides
Pf6N2E2_801 - Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-), at 931,771 to 932,919
_801
Pf6N2E2_802 - Threonine dehydratase biosynthetic (EC 4.3.1.19), at 933,262 to 934,269
_802
Pf6N2E2_803 - hypothetical protein, at 934,656 to 934,937
_803
Pf6N2E2_804 - Fructokinase (EC 2.7.1.4), at 935,037 to 935,975
_804
Position (kb) 933
934
935 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 932.281 kb on + strand, within Pf6N2E2_801 at 932.282 kb on - strand, within Pf6N2E2_801 at 932.292 kb on + strand, within Pf6N2E2_801 at 932.292 kb on + strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.365 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.555 kb on - strand, within Pf6N2E2_801 at 932.587 kb on + strand, within Pf6N2E2_801 at 932.587 kb on + strand, within Pf6N2E2_801 at 932.588 kb on - strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.860 kb on + strand at 932.860 kb on + strand at 932.861 kb on - strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.899 kb on + strand at 932.899 kb on + strand at 932.899 kb on + strand at 932.917 kb on + strand at 932.958 kb on + strand at 932.978 kb on + strand at 932.978 kb on + strand at 933.072 kb on + strand at 933.073 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.167 kb on + strand at 933.167 kb on + strand at 933.168 kb on - strand at 933.168 kb on - strand at 933.180 kb on - strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.306 kb on + strand at 933.306 kb on + strand at 933.306 kb on + strand at 933.307 kb on - strand at 933.331 kb on + strand at 933.331 kb on + strand at 933.332 kb on - strand at 933.332 kb on - strand at 933.454 kb on + strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.561 kb on + strand, within Pf6N2E2_802 at 933.562 kb on - strand, within Pf6N2E2_802 at 933.853 kb on + strand, within Pf6N2E2_802 at 933.854 kb on - strand, within Pf6N2E2_802 at 933.854 kb on - strand, within Pf6N2E2_802 at 933.862 kb on + strand, within Pf6N2E2_802 at 933.863 kb on - strand, within Pf6N2E2_802 at 933.878 kb on + strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 934.086 kb on + strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.282 kb on + strand at 934.283 kb on - strand at 934.333 kb on - strand at 934.335 kb on + strand at 934.342 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.348 kb on - strand at 934.393 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.542 kb on + strand at 934.572 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.663 kb on + strand at 934.663 kb on + strand at 934.955 kb on + strand at 934.955 kb on + strand at 934.956 kb on - strand at 935.056 kb on + strand at 935.214 kb on - strand, within Pf6N2E2_804
Per-strain Table
Position Strand Gene LocusTag Fraction periodate 0.00125 M remove 932,281 + Pf6N2E2_801 0.44 -0.9 932,282 - Pf6N2E2_801 0.44 +0.2 932,292 + Pf6N2E2_801 0.45 -2.3 932,292 + Pf6N2E2_801 0.45 +0.9 932,293 - Pf6N2E2_801 0.45 -0.4 932,293 - Pf6N2E2_801 0.45 +0.7 932,293 - Pf6N2E2_801 0.45 +0.1 932,365 + Pf6N2E2_801 0.52 +1.3 932,429 + Pf6N2E2_801 0.57 +1.3 932,429 + Pf6N2E2_801 0.57 +0.0 932,429 + Pf6N2E2_801 0.57 -0.3 932,429 + Pf6N2E2_801 0.57 +2.4 932,429 + Pf6N2E2_801 0.57 -1.5 932,429 + Pf6N2E2_801 0.57 -0.5 932,430 - Pf6N2E2_801 0.57 -0.5 932,430 - Pf6N2E2_801 0.57 +1.7 932,430 - Pf6N2E2_801 0.57 -0.3 932,430 - Pf6N2E2_801 0.57 -1.1 932,554 + Pf6N2E2_801 0.68 +0.2 932,554 + Pf6N2E2_801 0.68 +0.1 932,554 + Pf6N2E2_801 0.68 -0.3 932,555 - Pf6N2E2_801 0.68 +0.1 932,587 + Pf6N2E2_801 0.71 -1.2 932,587 + Pf6N2E2_801 0.71 +0.5 932,588 - Pf6N2E2_801 0.71 +0.4 932,692 + Pf6N2E2_801 0.80 -1.4 932,692 + Pf6N2E2_801 0.80 +0.5 932,692 + Pf6N2E2_801 0.80 +0.9 932,860 + +0.6 932,860 + +0.5 932,861 - -0.4 932,866 + -0.6 932,866 + -0.6 932,866 + +1.5 932,866 + -0.6 932,866 + -2.8 932,866 + +1.1 932,867 - -0.4 932,867 - +0.1 932,867 - -1.1 932,867 - +2.3 932,867 - -0.3 932,867 - -0.8 932,867 - -2.1 932,867 - +0.5 932,867 - -2.4 932,867 - +1.0 932,899 + -1.5 932,899 + -0.4 932,899 + -1.2 932,917 + +0.1 932,958 + -1.2 932,978 + +0.9 932,978 + +0.2 933,072 + +0.6 933,073 - -1.1 933,152 - -1.8 933,152 - -0.0 933,152 - +2.3 933,152 - -0.9 933,167 + +1.2 933,167 + -0.1 933,168 - +0.8 933,168 - -0.3 933,180 - +1.0 933,301 + +0.8 933,301 + +0.3 933,301 + +0.4 933,301 + +1.0 933,302 - -0.9 933,302 - +1.1 933,302 - -1.0 933,302 - -0.4 933,302 - -1.5 933,302 - +0.6 933,306 + -0.8 933,306 + +0.2 933,306 + +0.4 933,307 - -1.1 933,331 + -0.0 933,331 + -0.2 933,332 - -1.1 933,332 - +1.1 933,454 + Pf6N2E2_802 0.19 +0.7 933,455 - Pf6N2E2_802 0.19 +1.6 933,455 - Pf6N2E2_802 0.19 +1.1 933,455 - Pf6N2E2_802 0.19 -0.3 933,561 + Pf6N2E2_802 0.30 +1.2 933,562 - Pf6N2E2_802 0.30 +1.4 933,853 + Pf6N2E2_802 0.59 +1.7 933,854 - Pf6N2E2_802 0.59 +1.1 933,854 - Pf6N2E2_802 0.59 +1.4 933,862 + Pf6N2E2_802 0.60 +1.1 933,863 - Pf6N2E2_802 0.60 -0.4 933,878 + Pf6N2E2_802 0.61 +1.7 933,879 - Pf6N2E2_802 0.61 -1.2 933,879 - Pf6N2E2_802 0.61 +0.2 933,879 - Pf6N2E2_802 0.61 +1.2 934,086 + Pf6N2E2_802 0.82 +0.1 934,087 - Pf6N2E2_802 0.82 -0.1 934,087 - Pf6N2E2_802 0.82 +0.7 934,087 - Pf6N2E2_802 0.82 +1.3 934,090 + Pf6N2E2_802 0.82 -0.9 934,090 + Pf6N2E2_802 0.82 +0.7 934,090 + Pf6N2E2_802 0.82 -0.4 934,091 - Pf6N2E2_802 0.82 -0.1 934,091 - Pf6N2E2_802 0.82 +1.3 934,091 - Pf6N2E2_802 0.82 +1.5 934,091 - Pf6N2E2_802 0.82 +1.7 934,091 - Pf6N2E2_802 0.82 -1.3 934,153 + Pf6N2E2_802 0.88 +0.8 934,153 + Pf6N2E2_802 0.88 -1.5 934,153 + Pf6N2E2_802 0.88 +2.1 934,154 - Pf6N2E2_802 0.88 -1.2 934,154 - Pf6N2E2_802 0.88 -0.1 934,282 + +0.5 934,283 - -1.5 934,333 - +0.7 934,335 + -1.6 934,342 + +0.9 934,347 + -2.0 934,347 + +0.6 934,347 + -0.6 934,347 + +0.5 934,347 + -0.4 934,347 + -0.6 934,347 + -0.6 934,348 - -0.3 934,393 + +1.5 934,440 + +1.4 934,440 + -0.6 934,440 + -0.8 934,542 + +0.9 934,572 + +1.7 934,624 + -1.6 934,624 + -0.6 934,624 + +0.7 934,624 + +0.2 934,624 + -0.5 934,624 + -1.3 934,625 - +0.5 934,625 - +0.2 934,625 - -0.4 934,625 - +0.1 934,663 + -2.3 934,663 + +0.1 934,955 + -0.1 934,955 + -0.9 934,956 - +1.5 935,056 + +1.0 935,214 - Pf6N2E2_804 0.19 -0.3
Or see this region's nucleotide sequence