Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5113

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
5,896,844	-				-0.5
5,897,045	-		Pf6N2E2_5113	0.43	-0.1
5,897,045	-		Pf6N2E2_5113	0.43	-0.7
5,897,134	+		Pf6N2E2_5113	0.60	-1.1
5,897,135	-		Pf6N2E2_5113	0.61	-0.0
5,897,250	+		Pf6N2E2_5113	0.83	-0.8
5,897,250	+		Pf6N2E2_5113	0.83	-0.6
5,897,251	-		Pf6N2E2_5113	0.83	-0.6
5,897,251	-				+0.5
5,897,251	-		Pf6N2E2_5113	0.83	-0.9
5,897,251	-		Pf6N2E2_5113	0.83	+0.8
5,897,252	+		Pf6N2E2_5113	0.83	+0.6
5,897,252	+		Pf6N2E2_5113	0.83	+1.2
5,897,252	+		Pf6N2E2_5113	0.83	-0.3
5,897,252	+		Pf6N2E2_5113	0.83	-0.7
5,897,252	+		Pf6N2E2_5113	0.83	-1.9
5,897,253	-		Pf6N2E2_5113	0.84	-1.1
5,897,253	-		Pf6N2E2_5113	0.84	+0.0
5,897,253	-		Pf6N2E2_5113	0.84	-0.4
5,897,358	+				+1.5
5,897,359	-				+0.3
5,897,378	+				-2.8
5,897,378	+				-1.1
5,897,378	+				-0.0
5,897,379	-				+0.6
5,897,379	-				+0.6
5,897,379	-				-0.3
5,897,379	-				+0.8
5,897,379	-				+0.2
5,897,380	+				-0.7
5,897,464	+				-1.5
5,897,464	+				+0.7
5,897,464	+				+1.3
5,897,465	-				-0.4
5,897,465	-				+0.2
5,897,465	-				+1.1
5,897,465	-				-0.2
5,897,504	+				+1.0
5,897,504	+				+1.5
5,897,528	-				+0.4
5,897,528	-				+0.2
5,897,554	+				-1.5
5,897,554	+				+1.4
5,897,562	-				+0.9
5,897,562	-				+0.9
5,897,562	-				-0.2
5,897,571	+				+0.3
5,897,571	+				+0.7
5,897,572	-				+0.3
5,897,572	-				+0.1
5,897,572	-				-1.6
5,897,572	-				-0.9
5,897,572	-				-0.1
5,897,572	-				-0.2
5,897,573	+				-0.1
5,897,574	-				+0.8
5,897,574	-				+0.1
5,897,574	-				+0.6
5,897,610	-				+0.2
5,897,610	-				+0.2
5,897,610	-				+0.7
5,897,669	+		Pf6N2E2_5114	0.15	+1.3
5,897,670	-		Pf6N2E2_5114	0.15	-2.3
5,897,670	-		Pf6N2E2_5114	0.15	+0.5
5,897,844	+		Pf6N2E2_5114	0.52	-0.1
5,897,844	+		Pf6N2E2_5114	0.52	-0.6
5,897,844	+		Pf6N2E2_5114	0.52	+0.4
5,897,845	-		Pf6N2E2_5114	0.52	-0.4
5,897,845	-		Pf6N2E2_5114	0.52	+0.9
5,897,845	-		Pf6N2E2_5114	0.52	+0.6
5,897,845	-		Pf6N2E2_5114	0.52	-0.2
5,897,852	+		Pf6N2E2_5114	0.54	+0.3
5,897,872	+		Pf6N2E2_5114	0.58	-1.1
5,897,872	+		Pf6N2E2_5114	0.58	+0.3
5,897,872	+		Pf6N2E2_5114	0.58	+0.4
5,897,872	+		Pf6N2E2_5114	0.58	-1.7
5,897,937	-		Pf6N2E2_5114	0.72	+1.5
5,897,994	+		Pf6N2E2_5114	0.84	-0.3
5,897,994	+		Pf6N2E2_5114	0.84	+0.2
5,897,995	-		Pf6N2E2_5114	0.84	+0.2
5,897,995	-		Pf6N2E2_5114	0.84	+0.9
5,897,995	-		Pf6N2E2_5114	0.84	-0.1
5,897,995	-		Pf6N2E2_5114	0.84	+0.2
5,897,995	-		Pf6N2E2_5114	0.84	-0.5
5,897,995	-		Pf6N2E2_5114	0.84	-0.7
5,897,998	+		Pf6N2E2_5114	0.84	-0.7
5,897,998	+		Pf6N2E2_5114	0.84	+0.5
5,897,998	+		Pf6N2E2_5114	0.84	-0.2
5,897,998	+		Pf6N2E2_5114	0.84	-1.3
5,897,998	+		Pf6N2E2_5114	0.84	+1.1
5,897,998	+		Pf6N2E2_5114	0.84	-1.5
5,897,999	-		Pf6N2E2_5114	0.85	-0.9
5,897,999	-		Pf6N2E2_5114	0.85	-0.5
5,897,999	-		Pf6N2E2_5114	0.85	-0.7
5,898,050	-				-2.3
5,898,050	-				-0.8
5,898,188	+		Pf6N2E2_5115	0.26	+1.1
5,898,188	+		Pf6N2E2_5115	0.26	+0.3
5,898,189	-		Pf6N2E2_5115	0.26	-0.2
5,898,189	-		Pf6N2E2_5115	0.26	-1.5
5,898,234	-		Pf6N2E2_5115	0.36	+0.2
5,898,275	+		Pf6N2E2_5115	0.45	+0.8
5,898,275	+		Pf6N2E2_5115	0.45	-1.0
5,898,275	+		Pf6N2E2_5115	0.45	-1.4
5,898,276	-		Pf6N2E2_5115	0.45	+0.4
5,898,276	-		Pf6N2E2_5115	0.45	+0.5