Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4172

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
4,853,185	+		Pf6N2E2_4170	0.78	-1.2
4,853,186	-		Pf6N2E2_4170	0.78	-1.8
4,853,186	-		Pf6N2E2_4170	0.78	+0.2
4,853,310	-		Pf6N2E2_4170	0.84	+0.4
4,853,346	+		Pf6N2E2_4170	0.85	+0.4
4,853,346	+		Pf6N2E2_4170	0.85	-2.5
4,853,346	+		Pf6N2E2_4170	0.85	-0.0
4,853,347	-		Pf6N2E2_4170	0.86	-0.1
4,853,347	-		Pf6N2E2_4170	0.86	+2.5
4,853,347	-		Pf6N2E2_4170	0.86	+0.1
4,853,347	-		Pf6N2E2_4170	0.86	-0.0
4,853,347	-		Pf6N2E2_4170	0.86	+1.4
4,853,358	+		Pf6N2E2_4170	0.86	-0.0
4,853,358	+		Pf6N2E2_4170	0.86	+0.5
4,853,359	-		Pf6N2E2_4170	0.86	+0.6
4,853,359	-		Pf6N2E2_4170	0.86	-1.1
4,853,359	-		Pf6N2E2_4170	0.86	+1.3
4,853,359	-		Pf6N2E2_4170	0.86	+0.6
4,853,650	+				+1.6
4,853,650	+				-0.2
4,853,746	-				+0.7
4,853,784	+				+1.2
4,853,784	+				+0.8
4,853,785	-				-0.7
4,853,832	-				-1.7
4,853,832	-				-1.2
4,853,838	+				-2.3
4,853,839	-				-1.5
4,853,861	+		Pf6N2E2_4171	0.12	-0.7
4,853,861	+		Pf6N2E2_4171	0.12	-0.1
4,853,862	-		Pf6N2E2_4171	0.12	-0.4
4,853,919	-		Pf6N2E2_4171	0.41	-1.0
4,853,919	-		Pf6N2E2_4171	0.41	-2.4
4,853,944	+		Pf6N2E2_4171	0.53	-0.9
4,853,944	+		Pf6N2E2_4171	0.53	-0.3
4,854,332	+		Pf6N2E2_4172	0.31	-2.2
4,854,515	-		Pf6N2E2_4172	0.52	-2.2
4,854,744	-		Pf6N2E2_4172	0.79	-2.1
4,854,744	-		Pf6N2E2_4172	0.79	-1.4
4,854,744	-		Pf6N2E2_4172	0.79	-2.2
4,854,788	+		Pf6N2E2_4172	0.84	-0.3
4,854,788	+		Pf6N2E2_4172	0.84	-1.5
4,854,788	+		Pf6N2E2_4172	0.84	-0.3
4,854,789	-		Pf6N2E2_4172	0.84	-0.7
4,854,789	-		Pf6N2E2_4172	0.84	-2.4
4,854,789	-		Pf6N2E2_4172	0.84	-2.5
4,854,789	-		Pf6N2E2_4172	0.84	-0.2
4,855,061	+		Pf6N2E2_4173	0.20	-2.3
4,855,061	+		Pf6N2E2_4173	0.20	-2.2
4,855,062	-		Pf6N2E2_4173	0.20	-1.3
4,855,062	-		Pf6N2E2_4173	0.20	-2.2
4,855,105	+		Pf6N2E2_4173	0.26	-2.0
4,855,105	+		Pf6N2E2_4173	0.26	-1.5
4,855,105	+		Pf6N2E2_4173	0.26	-1.2
4,855,105	+		Pf6N2E2_4173	0.26	-1.2
4,855,105	+		Pf6N2E2_4173	0.26	-0.6
4,855,106	-		Pf6N2E2_4173	0.26	-1.7
4,855,106	-		Pf6N2E2_4173	0.26	-2.3
4,855,106	-		Pf6N2E2_4173	0.26	-2.4
4,855,398	+		Pf6N2E2_4173	0.70	-2.2
4,855,426	+		Pf6N2E2_4173	0.74	-2.0
4,855,583	+				+0.6
4,855,601	-				+0.3
4,855,675	+				-0.3
4,855,676	-				+0.2
4,855,676	-				+0.9
4,855,676	-				-0.3
4,855,676	-				-0.2
4,855,692	+				+0.8
4,855,693	-				+0.2
4,855,693	-				+0.5
4,855,693	-				+0.9
4,855,693	-				-1.1
4,855,850	+		Pf6N2E2_4174	0.22	-1.2
4,855,850	+		Pf6N2E2_4174	0.22	+1.4
4,855,850	+		Pf6N2E2_4174	0.22	-0.0
4,855,851	-		Pf6N2E2_4174	0.22	-0.7
4,855,851	-		Pf6N2E2_4174	0.22	+0.5
4,855,866	+		Pf6N2E2_4174	0.24	+0.6
4,855,867	-		Pf6N2E2_4174	0.24	-0.6
4,855,867	-		Pf6N2E2_4174	0.24	-0.4
4,855,867	-		Pf6N2E2_4174	0.24	+0.8
4,855,867	-		Pf6N2E2_4174	0.24	+0.1
4,855,916	+		Pf6N2E2_4174	0.30	-1.7
4,855,917	-		Pf6N2E2_4174	0.30	+0.0
4,855,917	-		Pf6N2E2_4174	0.30	-1.5