Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4113

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
4,790,695	+				-0.2
4,790,935	+		Pf6N2E2_4112	0.29	-1.6
4,790,935	+		Pf6N2E2_4112	0.29	+0.2
4,790,935	+		Pf6N2E2_4112	0.29	+0.1
4,790,935	+		Pf6N2E2_4112	0.29	-1.1
4,790,935	+		Pf6N2E2_4112	0.29	-0.3
4,790,936	-		Pf6N2E2_4112	0.29	+0.1
4,790,936	-		Pf6N2E2_4112	0.29	+0.7
4,790,936	-		Pf6N2E2_4112	0.29	+0.5
4,790,942	+		Pf6N2E2_4112	0.30	+0.7
4,790,959	+		Pf6N2E2_4112	0.32	-0.0
4,790,959	+		Pf6N2E2_4112	0.32	-0.1
4,790,959	+		Pf6N2E2_4112	0.32	+0.8
4,791,014	-		Pf6N2E2_4112	0.38	+0.2
4,791,090	+		Pf6N2E2_4112	0.47	+0.4
4,791,103	+		Pf6N2E2_4112	0.49	-1.3
4,791,103	+		Pf6N2E2_4112	0.49	+0.5
4,791,104	-		Pf6N2E2_4112	0.49	+0.5
4,791,115	+		Pf6N2E2_4112	0.50	+0.4
4,791,115	+		Pf6N2E2_4112	0.50	+0.6
4,791,115	+		Pf6N2E2_4112	0.50	+0.0
4,791,115	+		Pf6N2E2_4112	0.50	-1.1
4,791,129	+		Pf6N2E2_4112	0.52	+0.4
4,791,129	+		Pf6N2E2_4112	0.52	-1.4
4,791,129	+		Pf6N2E2_4112	0.52	-0.6
4,791,130	-		Pf6N2E2_4112	0.52	+0.5
4,791,130	-		Pf6N2E2_4112	0.52	-0.3
4,791,130	-		Pf6N2E2_4112	0.52	-1.3
4,791,132	+		Pf6N2E2_4112	0.52	-1.9
4,791,132	+		Pf6N2E2_4112	0.52	+1.1
4,791,132	+		Pf6N2E2_4112	0.52	+0.4
4,791,132	+		Pf6N2E2_4112	0.52	-1.6
4,791,132	+		Pf6N2E2_4112	0.52	-0.6
4,791,133	-		Pf6N2E2_4112	0.52	+1.1
4,791,133	-		Pf6N2E2_4112	0.52	-1.2
4,791,133	-		Pf6N2E2_4112	0.52	-1.2
4,791,135	+		Pf6N2E2_4112	0.53	-0.3
4,791,135	+		Pf6N2E2_4112	0.53	-0.1
4,791,135	+		Pf6N2E2_4112	0.53	+0.1
4,791,135	+		Pf6N2E2_4112	0.53	-2.0
4,791,135	+		Pf6N2E2_4112	0.53	-0.7
4,791,135	+		Pf6N2E2_4112	0.53	+0.7
4,791,135	+		Pf6N2E2_4112	0.53	+1.2
4,791,135	+		Pf6N2E2_4112	0.53	+0.6
4,791,135	+		Pf6N2E2_4112	0.53	-0.4
4,791,136	-		Pf6N2E2_4112	0.53	-1.4
4,791,136	-		Pf6N2E2_4112	0.53	+0.3
4,791,136	-		Pf6N2E2_4112	0.53	-0.1
4,791,136	-		Pf6N2E2_4112	0.53	+0.4
4,791,232	+		Pf6N2E2_4112	0.64	+0.1
4,791,232	+		Pf6N2E2_4112	0.64	-0.2
4,791,232	+		Pf6N2E2_4112	0.64	-0.1
4,791,232	+		Pf6N2E2_4112	0.64	+0.7
4,791,233	-		Pf6N2E2_4112	0.64	+0.0
4,791,233	-		Pf6N2E2_4112	0.64	-0.3
4,791,233	-		Pf6N2E2_4112	0.64	+1.0
4,791,332	+		Pf6N2E2_4112	0.76	-1.6
4,791,376	+		Pf6N2E2_4112	0.81	-0.5
4,791,377	-		Pf6N2E2_4112	0.81	-0.1
4,791,540	+				+1.1
4,791,540	+				-0.4
4,791,540	+				-0.9
4,791,540	+				-1.5
4,791,540	+				+0.3
4,791,540	+				+0.3
4,791,540	+				-1.0
4,791,540	+				-1.1
4,791,540	+				-0.9
4,791,541	-				-2.5
4,791,541	-				+0.6
4,791,541	-				-0.2
4,791,541	-				-0.1
4,791,541	-				-0.1
4,791,572	+				-1.5
4,791,572	+				+1.7
4,791,572	+				+0.4
4,791,572	+				-0.2
4,791,572	+				+1.1
4,791,572	+				+0.2
4,791,573	-				+0.4
4,791,580	+				+1.0
4,791,599	-				+0.4
4,791,599	-				+0.8
4,791,606	+				-1.8
4,791,607	-				-0.7
4,791,613	-				-0.7
4,791,613	-				-0.2
4,791,616	+				-1.0
4,791,616	+				-2.3
4,791,902	+		Pf6N2E2_4113	0.69	-0.2
4,791,903	-		Pf6N2E2_4113	0.69	-2.6
4,791,903	-		Pf6N2E2_4113	0.69	-0.2
4,791,985	+		Pf6N2E2_4113	0.89	-1.0
4,792,066	+				-0.3
4,792,066	+				-1.6
4,792,067	-				+0.7
4,792,067	-				-0.9
4,792,115	+				+0.8
4,792,116	-				-0.3
4,792,119	+				-0.6
4,792,119	+				-1.3
4,792,119	+				-0.0
4,792,230	+		Pf6N2E2_4114	0.36	+0.5
4,792,285	+		Pf6N2E2_4114	0.61	+0.3
4,792,285	+		Pf6N2E2_4114	0.61	-1.6
4,792,285	+		Pf6N2E2_4114	0.61	+0.7
4,792,286	-		Pf6N2E2_4114	0.62	-0.3
4,792,286	-		Pf6N2E2_4114	0.62	+1.2
4,792,306	+		Pf6N2E2_4114	0.71	+0.6
4,792,306	+		Pf6N2E2_4114	0.71	+0.2
4,792,307	-		Pf6N2E2_4114	0.71	-0.6
4,792,313	+		Pf6N2E2_4114	0.74	-0.6
4,792,357	+				+0.1
4,792,358	-				+0.5
4,792,359	+				+0.2
4,792,359	+				-0.4
4,792,507	-				+0.1
4,792,510	+				+0.4
4,792,655	-				-0.8
4,792,695	-				+0.7
4,792,695	-				+0.0
4,792,751	-				-0.4
4,792,770	+				+2.8
4,792,842	+				-0.5
4,792,847	+				-0.8
4,792,981	+				-0.2
4,792,984	-				+0.7
4,792,984	-				-0.9
4,792,987	+				-1.0
4,792,987	+				+2.1
4,792,987	+				-1.1
4,792,987	+				-0.8
4,793,029	+				+0.7