Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3803

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
4,429,821	+				+0.5
4,429,821	+				+1.0
4,429,821	+				+0.1
4,429,822	-				-1.2
4,429,834	+				-0.3
4,429,834	+				-0.7
4,429,834	+				+0.5
4,429,834	+				+0.8
4,429,835	-				-0.9
4,430,102	+		Pf6N2E2_3802	0.37	-0.4
4,430,151	+		Pf6N2E2_3802	0.42	+1.3
4,430,151	+		Pf6N2E2_3802	0.42	+0.4
4,430,151	+		Pf6N2E2_3802	0.42	-0.0
4,430,152	-		Pf6N2E2_3802	0.42	-1.3
4,430,152	-		Pf6N2E2_3802	0.42	-0.2
4,430,217	+		Pf6N2E2_3802	0.50	+0.1
4,430,217	+		Pf6N2E2_3802	0.50	+0.2
4,430,568	+				+1.1
4,430,568	+				-2.1
4,430,568	+				+0.0
4,430,568	+				+2.1
4,430,623	+				-0.4
4,430,623	+				+0.5
4,430,641	+				+0.2
4,430,641	+				-0.6
4,430,641	+				+0.4
4,430,641	+				-0.0
4,430,641	+				+0.8
4,430,641	+				+0.4
4,430,642	-				-1.6
4,430,642	-				-1.4
4,430,688	+				-0.5
4,430,712	+				-0.3
4,430,712	+				+0.7
4,431,019	-		Pf6N2E2_3803	0.32	-1.5
4,431,019	-		Pf6N2E2_3803	0.32	+0.1
4,431,021	+		Pf6N2E2_3803	0.32	-1.7
4,431,021	+		Pf6N2E2_3803	0.32	-0.9
4,431,021	+		Pf6N2E2_3803	0.32	+0.2
4,431,022	-		Pf6N2E2_3803	0.32	-1.9
4,431,022	-		Pf6N2E2_3803	0.32	-0.2
4,431,022	-		Pf6N2E2_3803	0.32	-0.9
4,431,048	+		Pf6N2E2_3803	0.35	-2.0
4,431,048	+		Pf6N2E2_3803	0.35	-1.3
4,431,048	+		Pf6N2E2_3803	0.35	-0.9
4,431,105	+		Pf6N2E2_3803	0.41	-1.5
4,431,106	-		Pf6N2E2_3803	0.41	-0.6
4,431,123	+		Pf6N2E2_3803	0.43	+0.8
4,431,180	+		Pf6N2E2_3803	0.48	-0.2
4,431,228	+		Pf6N2E2_3803	0.53	-1.3
4,431,306	+		Pf6N2E2_3803	0.61	-1.4
4,431,306	+		Pf6N2E2_3803	0.61	-0.4
4,431,318	+		Pf6N2E2_3803	0.63	+1.1
4,431,318	+		Pf6N2E2_3803	0.63	+1.6
4,431,318	+		Pf6N2E2_3803	0.63	+1.3
4,431,319	-		Pf6N2E2_3803	0.63	-0.1
4,431,319	-		Pf6N2E2_3803	0.63	-2.0
4,431,319	-		Pf6N2E2_3803	0.63	-1.4
4,431,319	-		Pf6N2E2_3803	0.63	+0.7
4,431,319	-		Pf6N2E2_3803	0.63	-1.7
4,431,319	-		Pf6N2E2_3803	0.63	+0.1
4,431,319	-		Pf6N2E2_3803	0.63	-0.5
4,431,502	-		Pf6N2E2_3803	0.82	-0.1
4,431,680	+				+0.7
4,431,680	+				+1.0
4,431,680	+				-0.5
4,431,680	+				+0.2
4,431,680	+				+0.2
4,431,681	-				-2.2
4,431,681	-				-0.7
4,431,693	+				+0.8
4,431,693	+				+0.5
4,431,863	-				-0.5
4,431,863	-				-1.8
4,431,865	+				-0.4
4,431,866	-				+0.4
4,431,866	-				-1.5
4,431,866	-				-1.2
4,431,866	-				-1.8
4,431,943	+		Pf6N2E2_3804	0.13	+0.6
4,431,943	+		Pf6N2E2_3804	0.13	-0.6
4,431,943	+		Pf6N2E2_3804	0.13	-1.1
4,431,943	+		Pf6N2E2_3804	0.13	-1.2
4,431,960	-		Pf6N2E2_3804	0.14	-0.3
4,431,991	+		Pf6N2E2_3804	0.16	+0.7
4,431,991	+		Pf6N2E2_3804	0.16	-0.1
4,431,991	+		Pf6N2E2_3804	0.16	-0.3
4,432,060	+		Pf6N2E2_3804	0.21	-1.4
4,432,060	+		Pf6N2E2_3804	0.21	-3.0
4,432,081	+		Pf6N2E2_3804	0.23	+0.2
4,432,081	+		Pf6N2E2_3804	0.23	+0.3
4,432,081	+		Pf6N2E2_3804	0.23	+0.4
4,432,081	+		Pf6N2E2_3804	0.23	+0.0
4,432,084	+		Pf6N2E2_3804	0.23	-0.6
4,432,084	+		Pf6N2E2_3804	0.23	+0.5
4,432,084	+		Pf6N2E2_3804	0.23	+1.1
4,432,085	-		Pf6N2E2_3804	0.23	+0.5
4,432,085	-		Pf6N2E2_3804	0.23	-2.0
4,432,085	-		Pf6N2E2_3804	0.23	+0.7
4,432,085	-		Pf6N2E2_3804	0.23	-1.2
4,432,301	-		Pf6N2E2_3804	0.38	-1.4
4,432,348	+		Pf6N2E2_3804	0.41	-0.1
4,432,348	+		Pf6N2E2_3804	0.41	-1.2
4,432,348	+		Pf6N2E2_3804	0.41	-0.7
4,432,349	-		Pf6N2E2_3804	0.41	-1.2
4,432,393	+		Pf6N2E2_3804	0.44	+1.1
4,432,393	+		Pf6N2E2_3804	0.44	+0.0
4,432,393	+		Pf6N2E2_3804	0.44	-0.7
4,432,543	+		Pf6N2E2_3804	0.54	-1.9
4,432,543	+		Pf6N2E2_3804	0.54	-0.2