Experiment: periodate 0.00125 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_368 and Pf6N2E2_369 are separated by 40 nucleotides Pf6N2E2_369 and Pf6N2E2_370 are separated by 131 nucleotides Pf6N2E2_370 and Pf6N2E2_371 are separated by 41 nucleotides
Pf6N2E2_368 - Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16), at 435,040 to 436,497
_368
Pf6N2E2_369 - Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83), at 436,538 to 437,617
_369
Pf6N2E2_370 - Predicted enzyme of the cupin superfamily, at 437,749 to 438,456
_370
Pf6N2E2_371 - Histone acetyltransferase HPA2 and related acetyltransferases, at 438,498 to 439,355
_371
Position (kb) 436
437
438 Strain fitness (log2 ratio) -2
-1
0
1
2 at 435.952 kb on + strand, within Pf6N2E2_368 at 435.952 kb on + strand, within Pf6N2E2_368 at 435.952 kb on + strand, within Pf6N2E2_368 at 435.953 kb on - strand, within Pf6N2E2_368 at 436.236 kb on + strand, within Pf6N2E2_368 at 436.239 kb on + strand, within Pf6N2E2_368 at 436.295 kb on - strand, within Pf6N2E2_368 at 436.297 kb on + strand, within Pf6N2E2_368 at 436.297 kb on + strand, within Pf6N2E2_368 at 436.444 kb on + strand at 436.445 kb on - strand at 436.445 kb on - strand at 436.445 kb on - strand at 436.459 kb on + strand at 436.686 kb on - strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.688 kb on + strand, within Pf6N2E2_369 at 436.689 kb on - strand, within Pf6N2E2_369 at 436.754 kb on + strand, within Pf6N2E2_369 at 436.844 kb on + strand, within Pf6N2E2_369 at 436.844 kb on + strand, within Pf6N2E2_369 at 436.845 kb on - strand, within Pf6N2E2_369 at 436.955 kb on + strand, within Pf6N2E2_369 at 437.405 kb on + strand, within Pf6N2E2_369 at 437.405 kb on + strand, within Pf6N2E2_369 at 437.405 kb on + strand, within Pf6N2E2_369 at 437.405 kb on + strand, within Pf6N2E2_369 at 437.406 kb on - strand, within Pf6N2E2_369 at 437.490 kb on - strand, within Pf6N2E2_369 at 437.740 kb on + strand at 437.751 kb on - strand at 437.763 kb on - strand at 437.763 kb on - strand at 437.777 kb on + strand at 437.777 kb on + strand at 437.777 kb on + strand at 437.777 kb on + strand at 437.777 kb on + strand at 437.778 kb on - strand at 437.821 kb on + strand, within Pf6N2E2_370 at 437.869 kb on + strand, within Pf6N2E2_370 at 437.869 kb on + strand, within Pf6N2E2_370 at 437.937 kb on - strand, within Pf6N2E2_370 at 437.937 kb on - strand, within Pf6N2E2_370 at 437.956 kb on - strand, within Pf6N2E2_370 at 437.956 kb on - strand, within Pf6N2E2_370 at 438.238 kb on + strand, within Pf6N2E2_370 at 438.345 kb on - strand, within Pf6N2E2_370
Per-strain Table
Position Strand Gene LocusTag Fraction periodate 0.00125 M remove 435,952 + Pf6N2E2_368 0.63 -0.5 435,952 + Pf6N2E2_368 0.63 -1.6 435,952 + Pf6N2E2_368 0.63 +0.6 435,953 - Pf6N2E2_368 0.63 -1.2 436,236 + Pf6N2E2_368 0.82 -0.2 436,239 + Pf6N2E2_368 0.82 -2.0 436,295 - Pf6N2E2_368 0.86 -1.0 436,297 + Pf6N2E2_368 0.86 -0.7 436,297 + Pf6N2E2_368 0.86 +1.1 436,444 + -1.4 436,445 - -1.0 436,445 - -1.0 436,445 - -0.2 436,459 + -0.8 436,686 - Pf6N2E2_369 0.14 -0.2 436,688 + Pf6N2E2_369 0.14 -0.4 436,688 + Pf6N2E2_369 0.14 -0.5 436,688 + Pf6N2E2_369 0.14 -0.2 436,688 + Pf6N2E2_369 0.14 +0.3 436,688 + Pf6N2E2_369 0.14 +0.4 436,688 + Pf6N2E2_369 0.14 +0.1 436,689 - Pf6N2E2_369 0.14 +1.8 436,754 + Pf6N2E2_369 0.20 -1.0 436,844 + Pf6N2E2_369 0.28 -1.2 436,844 + Pf6N2E2_369 0.28 -0.7 436,845 - Pf6N2E2_369 0.28 -0.4 436,955 + Pf6N2E2_369 0.39 +0.1 437,405 + Pf6N2E2_369 0.80 +1.1 437,405 + Pf6N2E2_369 0.80 -2.0 437,405 + Pf6N2E2_369 0.80 -1.5 437,405 + Pf6N2E2_369 0.80 -0.2 437,406 - Pf6N2E2_369 0.80 +0.8 437,490 - Pf6N2E2_369 0.88 +0.2 437,740 + -1.3 437,751 - -0.5 437,763 - -2.0 437,763 - +1.1 437,777 + +0.1 437,777 + -1.3 437,777 + -0.2 437,777 + +0.2 437,777 + -0.4 437,778 - -0.6 437,821 + Pf6N2E2_370 0.10 -1.6 437,869 + Pf6N2E2_370 0.17 -1.0 437,869 + Pf6N2E2_370 0.17 +1.1 437,937 - Pf6N2E2_370 0.27 -0.1 437,937 - Pf6N2E2_370 0.27 +0.1 437,956 - Pf6N2E2_370 0.29 -0.1 437,956 - Pf6N2E2_370 0.29 +1.6 438,238 + Pf6N2E2_370 0.69 +1.6 438,345 - Pf6N2E2_370 0.84 +0.1
Or see this region's nucleotide sequence