Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3284

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
3,790,238	-		Pf6N2E2_3283	0.47	-2.0
3,790,388	-		Pf6N2E2_3283	0.58	+0.4
3,790,637	-		Pf6N2E2_3283	0.75	-1.0
3,790,637	-		Pf6N2E2_3283	0.75	+1.2
3,790,637	-		Pf6N2E2_3283	0.75	+0.8
3,790,878	-				-0.6
3,790,880	-				+0.5
3,790,880	-				+1.8
3,790,880	-				-0.2
3,790,880	-				-0.3
3,790,884	-				-0.8
3,790,884	-				+1.4
3,790,884	-				-1.5
3,791,091	-				+0.9
3,791,091	-				+0.3
3,791,109	-				+1.2
3,791,109	-				+0.1
3,791,109	-				-1.4
3,791,109	-				+0.7
3,791,152	-		Pf6N2E2_3284	0.15	-0.1
3,791,152	-		Pf6N2E2_3284	0.15	-0.3
3,791,152	-		Pf6N2E2_3284	0.15	-0.8
3,791,198	-		Pf6N2E2_3284	0.23	-1.3
3,791,198	-		Pf6N2E2_3284	0.23	-0.2
3,791,198	-		Pf6N2E2_3284	0.23	-2.3
3,791,342	+		Pf6N2E2_3284	0.47	+2.4
3,791,343	-		Pf6N2E2_3284	0.47	-0.3
3,791,343	-		Pf6N2E2_3284	0.47	-1.2
3,791,343	-		Pf6N2E2_3284	0.47	-1.7
3,791,343	-		Pf6N2E2_3284	0.47	-0.2
3,791,343	-		Pf6N2E2_3284	0.47	-1.2
3,791,527	-		Pf6N2E2_3284	0.78	-1.4
3,791,644	-				-0.9
3,791,644	-				+0.0
3,791,644	-				-1.5
3,791,755	-				-1.6
3,791,804	+				+1.6
3,791,804	+				-0.9
3,791,805	-				-2.1
3,791,805	-				-0.5
3,791,805	-				+0.8
3,791,805	-				-0.8
3,791,805	-				-0.5
3,791,805	-				-0.5
3,791,805	-				+0.2
3,791,805	-				-0.2
3,791,805	-				-0.4
3,791,805	-				-1.6
3,791,805	-				-2.5
3,791,805	-				-0.1
3,791,805	-				-1.7
3,791,805	-				+0.4
3,791,805	-				-0.3
3,791,805	-				-0.9
3,791,805	-				-1.0
3,791,805	-				+0.8
3,791,805	-				-0.7
3,791,823	+				+1.4
3,791,824	-				+0.7
3,791,824	-				-0.2
3,791,828	-				-0.3
3,792,032	-		Pf6N2E2_3285	0.39	-0.2
3,792,032	-		Pf6N2E2_3285	0.39	-0.4
3,792,032	-		Pf6N2E2_3285	0.39	+0.3
3,792,032	-		Pf6N2E2_3285	0.39	-0.2
3,792,032	-		Pf6N2E2_3285	0.39	-0.9
3,792,032	-		Pf6N2E2_3285	0.39	-0.1