Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2905

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
3,394,789	+		Pf6N2E2_2903	0.29	+0.7
3,394,789	+		Pf6N2E2_2903	0.29	-1.6
3,394,790	-		Pf6N2E2_2903	0.29	+0.1
3,394,790	-		Pf6N2E2_2903	0.29	+1.0
3,394,790	-		Pf6N2E2_2903	0.29	-0.0
3,394,790	-		Pf6N2E2_2903	0.29	-0.8
3,395,166	+				-0.4
3,395,167	-				-0.0
3,395,189	-				-2.4
3,395,189	-				+0.3
3,395,301	+		Pf6N2E2_2904	0.11	+0.1
3,395,566	-		Pf6N2E2_2904	0.71	-1.5
3,395,566	-		Pf6N2E2_2904	0.71	+1.0
3,395,696	+				+1.3
3,395,696	+				+0.6
3,395,696	+				-0.0
3,395,696	+				+0.5
3,395,696	+				+1.1
3,395,696	+				+0.1
3,395,696	+				+0.0
3,395,696	+				+0.6
3,395,696	+				+1.8
3,395,697	-				+0.7
3,395,697	-				-3.0
3,395,697	-				+1.4
3,395,697	-				+0.1
3,395,697	-				+0.3
3,395,712	+				+0.4
3,395,712	+				+1.7
3,396,010	+		Pf6N2E2_2905	0.21	-1.2
3,396,010	+		Pf6N2E2_2905	0.21	-0.8
3,396,011	-		Pf6N2E2_2905	0.21	-0.9
3,396,551	-		Pf6N2E2_2905	0.61	-1.1
3,396,917	+		Pf6N2E2_2905	0.88	+0.1
3,396,918	-		Pf6N2E2_2905	0.88	-1.4
3,397,159	+				-0.5
3,397,159	+				-0.4
3,397,160	-				-1.3
3,397,286	+				+0.9
3,397,286	+				-1.8
3,397,287	-				-0.5
3,397,287	-				+1.3
3,397,287	-				-0.9
3,397,287	-				-0.4
3,397,287	-				-0.2
3,397,287	-				+0.6
3,397,296	-				+0.1
3,397,296	-				+0.4
3,397,412	+		Pf6N2E2_2906	0.10	-2.1
3,397,412	+		Pf6N2E2_2906	0.10	+0.8
3,397,412	+		Pf6N2E2_2906	0.10	+0.8
3,397,413	-		Pf6N2E2_2906	0.10	-0.3
3,397,413	-		Pf6N2E2_2906	0.10	+2.3
3,397,436	+		Pf6N2E2_2906	0.12	+1.3
3,397,436	+		Pf6N2E2_2906	0.12	+0.3
3,397,436	+		Pf6N2E2_2906	0.12	-0.3
3,397,437	-		Pf6N2E2_2906	0.12	+0.5
3,397,454	+		Pf6N2E2_2906	0.13	-2.0
3,397,455	-		Pf6N2E2_2906	0.13	+0.1
3,397,455	-		Pf6N2E2_2906	0.13	+0.3
3,397,472	+		Pf6N2E2_2906	0.15	+1.2
3,397,473	-		Pf6N2E2_2906	0.15	+0.9
3,397,532	+		Pf6N2E2_2906	0.19	+0.9
3,397,532	+		Pf6N2E2_2906	0.19	+0.9
3,397,532	+		Pf6N2E2_2906	0.19	+0.5
3,397,532	+		Pf6N2E2_2906	0.19	-0.3
3,397,533	-		Pf6N2E2_2906	0.19	-0.8
3,397,566	-		Pf6N2E2_2906	0.21	+0.2
3,397,583	+		Pf6N2E2_2906	0.22	+0.4
3,397,584	-		Pf6N2E2_2906	0.22	-1.9
3,397,584	-		Pf6N2E2_2906	0.22	-0.6
3,397,584	-		Pf6N2E2_2906	0.22	+0.4
3,397,613	+		Pf6N2E2_2906	0.24	+0.1
3,397,613	+		Pf6N2E2_2906	0.24	+0.3
3,397,613	+		Pf6N2E2_2906	0.24	-0.2
3,397,614	-		Pf6N2E2_2906	0.25	+1.2
3,397,614	-		Pf6N2E2_2906	0.25	+2.5
3,397,628	+		Pf6N2E2_2906	0.25	+2.3
3,397,628	+		Pf6N2E2_2906	0.25	-0.9
3,397,628	+		Pf6N2E2_2906	0.25	-0.1
3,397,628	+		Pf6N2E2_2906	0.25	+1.7
3,397,629	-		Pf6N2E2_2906	0.26	+0.6
3,397,629	-		Pf6N2E2_2906	0.26	-0.6
3,397,629	-		Pf6N2E2_2906	0.26	+0.3
3,397,629	-		Pf6N2E2_2906	0.26	+0.6
3,397,629	-		Pf6N2E2_2906	0.26	+0.1
3,398,002	+		Pf6N2E2_2906	0.52	+0.7
3,398,002	+		Pf6N2E2_2906	0.52	+0.9
3,398,002	+		Pf6N2E2_2906	0.52	-0.4
3,398,003	-		Pf6N2E2_2906	0.52	-0.4
3,398,003	-		Pf6N2E2_2906	0.52	-0.7
3,398,033	+		Pf6N2E2_2906	0.54	-0.7
3,398,033	+		Pf6N2E2_2906	0.54	-0.4
3,398,034	-		Pf6N2E2_2906	0.54	-0.1
3,398,034	-		Pf6N2E2_2906	0.54	-2.3