Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2090

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
2,484,998	-		Pf6N2E2_2089	0.48	+0.5
2,484,998	-		Pf6N2E2_2089	0.48	+1.3
2,484,998	-		Pf6N2E2_2089	0.48	+2.3
2,484,998	-		Pf6N2E2_2089	0.48	+1.2
2,485,066	+		Pf6N2E2_2089	0.54	-0.8
2,485,067	-		Pf6N2E2_2089	0.55	-0.7
2,485,067	-		Pf6N2E2_2089	0.55	-0.7
2,485,067	-		Pf6N2E2_2089	0.55	-0.3
2,485,254	+		Pf6N2E2_2089	0.72	+1.6
2,485,255	-		Pf6N2E2_2089	0.73	+0.3
2,485,255	-		Pf6N2E2_2089	0.73	+0.0
2,485,483	-				-0.2
2,485,513	+				-0.6
2,485,514	-				-1.0
2,485,563	+				-0.0
2,485,563	+				-0.5
2,485,564	-				+0.2
2,485,564	-				+0.8
2,485,564	-				+0.4
2,485,564	-				+0.6
2,485,653	+				-0.1
2,485,653	+				-0.5
2,485,666	-				+0.7
2,485,693	+				+0.8
2,485,699	+				-0.1
2,485,699	+				-0.6
2,485,700	-				-0.2
2,485,700	-				+1.3
2,485,731	+				+0.9
2,485,731	+				-0.8
2,485,731	+				+1.1
2,485,732	-				+1.0
2,485,732	-				-2.6
2,485,732	-				+0.7
2,485,734	+				-1.2
2,485,734	+				-1.5
2,485,734	+				-1.7
2,485,735	-				+0.5
2,485,735	-				-0.5
2,485,735	-				-2.2
2,485,928	+		Pf6N2E2_2090	0.19	-1.4
2,485,928	+		Pf6N2E2_2090	0.19	-1.2
2,485,931	+		Pf6N2E2_2090	0.19	+0.6
2,485,931	+		Pf6N2E2_2090	0.19	-1.2
2,485,931	+		Pf6N2E2_2090	0.19	-2.2
2,485,932	-		Pf6N2E2_2090	0.19	-0.0
2,485,940	+		Pf6N2E2_2090	0.20	+1.1
2,485,940	+		Pf6N2E2_2090	0.20	+0.5
2,485,941	-		Pf6N2E2_2090	0.20	+1.7
2,485,941	-		Pf6N2E2_2090	0.20	+1.0
2,485,941	-		Pf6N2E2_2090	0.20	+0.7
2,486,072	+		Pf6N2E2_2090	0.34	-1.2
2,486,072	+		Pf6N2E2_2090	0.34	+0.3
2,486,073	-		Pf6N2E2_2090	0.34	-0.8
2,486,073	-		Pf6N2E2_2090	0.34	+0.6
2,486,073	-		Pf6N2E2_2090	0.34	-1.8
2,486,073	-		Pf6N2E2_2090	0.34	-1.2
2,486,234	+		Pf6N2E2_2090	0.51	-1.1
2,486,235	-		Pf6N2E2_2090	0.52	-1.6
2,486,235	-		Pf6N2E2_2090	0.52	-1.6
2,486,235	-		Pf6N2E2_2090	0.52	+1.5
2,486,273	+		Pf6N2E2_2090	0.56	-0.8
2,486,273	+		Pf6N2E2_2090	0.56	+0.3
2,486,273	+		Pf6N2E2_2090	0.56	-1.0
2,486,279	+		Pf6N2E2_2090	0.56	-1.2
2,486,279	+		Pf6N2E2_2090	0.56	-0.3
2,486,280	-		Pf6N2E2_2090	0.56	-0.3
2,486,280	-		Pf6N2E2_2090	0.56	-0.1
2,486,280	-		Pf6N2E2_2090	0.56	-0.1
2,486,280	-		Pf6N2E2_2090	0.56	+1.1
2,486,280	-		Pf6N2E2_2090	0.56	-0.4
2,486,280	-		Pf6N2E2_2090	0.56	-1.0
2,486,280	-		Pf6N2E2_2090	0.56	-0.2
2,486,345	+		Pf6N2E2_2090	0.63	-0.9
2,486,345	+		Pf6N2E2_2090	0.63	-0.5
2,486,345	+		Pf6N2E2_2090	0.63	-0.7
2,486,345	+		Pf6N2E2_2090	0.63	+0.1
2,486,346	-		Pf6N2E2_2090	0.63	-0.8
2,486,460	-		Pf6N2E2_2090	0.75	+0.0
2,486,462	+		Pf6N2E2_2090	0.76	+0.1
2,486,463	-		Pf6N2E2_2090	0.76	-0.9
2,486,463	-		Pf6N2E2_2090	0.76	-0.5
2,486,463	-		Pf6N2E2_2090	0.76	-1.6
2,486,591	+		Pf6N2E2_2090	0.89	-1.2
2,486,592	-		Pf6N2E2_2090	0.89	-1.9
2,486,592	-		Pf6N2E2_2090	0.89	-0.2
2,486,592	-		Pf6N2E2_2090	0.89	-0.0
2,486,674	+				+0.4
2,486,674	+				-0.0
2,486,674	+				-0.5
2,486,675	-				-0.9
2,486,690	+				+1.0
2,486,690	+				-0.1
2,486,752	-				+0.7
2,486,752	-				-1.2
2,487,069	+		Pf6N2E2_2091	0.11	-1.3
2,487,070	-		Pf6N2E2_2091	0.12	-0.4
2,487,198	+		Pf6N2E2_2091	0.21	+0.4
2,487,199	-		Pf6N2E2_2091	0.21	-0.5
2,487,199	-		Pf6N2E2_2091	0.21	-2.2
2,487,199	-		Pf6N2E2_2091	0.21	-0.4
2,487,204	+		Pf6N2E2_2091	0.21	-0.4
2,487,204	+		Pf6N2E2_2091	0.21	-1.2
2,487,298	-		Pf6N2E2_2091	0.28	-1.4
2,487,336	+		Pf6N2E2_2091	0.31	-2.1
2,487,337	-		Pf6N2E2_2091	0.31	+0.8
2,487,337	-		Pf6N2E2_2091	0.31	+1.4
2,487,433	-		Pf6N2E2_2091	0.38	+1.1
2,487,433	-		Pf6N2E2_2091	0.38	+1.8
2,487,433	-		Pf6N2E2_2091	0.38	+0.1
2,487,544	-		Pf6N2E2_2091	0.46	-0.6
2,487,544	-		Pf6N2E2_2091	0.46	-1.0