Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1910

Experiment: periodate 0.00125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	periodate 0.00125 M
2,263,254	-		Pf6N2E2_1909	0.33	-0.9
2,263,263	+		Pf6N2E2_1909	0.34	-0.0
2,263,263	+		Pf6N2E2_1909	0.34	+1.0
2,263,263	+		Pf6N2E2_1909	0.34	-0.8
2,263,264	-		Pf6N2E2_1909	0.34	-1.6
2,263,264	-		Pf6N2E2_1909	0.34	+0.7
2,263,264	-		Pf6N2E2_1909	0.34	+2.3
2,263,264	-		Pf6N2E2_1909	0.34	-0.2
2,263,264	-		Pf6N2E2_1909	0.34	+1.6
2,263,269	+		Pf6N2E2_1909	0.34	+0.6
2,263,270	-		Pf6N2E2_1909	0.35	-1.4
2,263,373	-		Pf6N2E2_1909	0.48	-1.3
2,263,373	-		Pf6N2E2_1909	0.48	-1.6
2,263,374	+		Pf6N2E2_1909	0.48	-1.3
2,263,375	-		Pf6N2E2_1909	0.48	-2.9
2,263,375	-		Pf6N2E2_1909	0.48	+0.8
2,263,375	-		Pf6N2E2_1909	0.48	+0.5
2,263,415	+		Pf6N2E2_1909	0.53	-0.9
2,263,416	-		Pf6N2E2_1909	0.53	+2.8
2,263,471	+		Pf6N2E2_1909	0.60	+2.8
2,263,472	-		Pf6N2E2_1909	0.60	+1.0
2,263,472	-		Pf6N2E2_1909	0.60	+1.0
2,263,472	-		Pf6N2E2_1909	0.60	+1.1
2,263,474	-		Pf6N2E2_1909	0.60	+0.3
2,263,474	-		Pf6N2E2_1909	0.60	+0.4
2,263,477	+		Pf6N2E2_1909	0.61	-0.9
2,263,477	+		Pf6N2E2_1909	0.61	-0.3
2,263,478	-		Pf6N2E2_1909	0.61	-1.9
2,263,478	-		Pf6N2E2_1909	0.61	+0.6
2,263,478	-		Pf6N2E2_1909	0.61	+0.2
2,263,506	-		Pf6N2E2_1909	0.64	+0.8
2,263,543	+		Pf6N2E2_1909	0.69	+0.9
2,263,567	-		Pf6N2E2_1909	0.72	-0.9
2,263,622	+		Pf6N2E2_1909	0.79	-0.1
2,263,622	+		Pf6N2E2_1909	0.79	+1.0
2,263,623	-		Pf6N2E2_1909	0.79	+2.4
2,263,623	-		Pf6N2E2_1909	0.79	-1.0
2,263,623	-		Pf6N2E2_1909	0.79	-2.3
2,263,623	-				-0.5
2,263,623	-		Pf6N2E2_1909	0.79	+0.2
2,263,623	-		Pf6N2E2_1909	0.79	+1.2
2,263,718	+				+0.8
2,263,718	+				-0.4
2,263,719	-				-0.1
2,263,722	-				-0.5
2,263,722	-				+1.8
2,263,722	-				-0.6
2,263,830	-				-1.4
2,263,870	+				-2.1
2,263,973	+				+0.5
2,263,997	+				+0.5
2,263,997	+				-0.5
2,263,997	+				-0.2
2,263,998	-				+0.6
2,263,998	-				+0.1
2,264,017	+				-1.0
2,264,017	+				-0.3
2,264,018	-				+1.1
2,264,018	-				-1.0
2,264,024	+				-2.3
2,264,047	+				+0.2
2,264,048	-				+0.1
2,264,480	+		Pf6N2E2_1910	0.37	+0.3
2,264,480	+		Pf6N2E2_1910	0.37	+0.5
2,264,480	+		Pf6N2E2_1910	0.37	-1.3
2,264,480	+		Pf6N2E2_1910	0.37	-0.4
2,264,480	+		Pf6N2E2_1910	0.37	+0.5
2,264,480	+		Pf6N2E2_1910	0.37	+0.5
2,264,480	+		Pf6N2E2_1910	0.37	-0.3
2,264,480	+		Pf6N2E2_1910	0.37	+1.2
2,264,480	+		Pf6N2E2_1910	0.37	-0.9
2,264,480	+		Pf6N2E2_1910	0.37	+0.6
2,264,480	+		Pf6N2E2_1910	0.37	-1.3
2,264,480	+		Pf6N2E2_1910	0.37	+0.1
2,264,481	-		Pf6N2E2_1910	0.37	-0.6
2,264,481	-		Pf6N2E2_1910	0.37	+1.1
2,264,481	-		Pf6N2E2_1910	0.37	-0.4
2,264,481	-		Pf6N2E2_1910	0.37	+0.5
2,264,481	-		Pf6N2E2_1910	0.37	-0.4
2,264,481	-		Pf6N2E2_1910	0.37	-0.0
2,264,481	-		Pf6N2E2_1910	0.37	-1.4
2,264,481	-		Pf6N2E2_1910	0.37	+1.3
2,264,481	-		Pf6N2E2_1910	0.37	+2.2
2,264,481	-		Pf6N2E2_1910	0.37	+0.7
2,264,481	-		Pf6N2E2_1910	0.37	+0.8
2,264,481	-		Pf6N2E2_1910	0.37	+0.3
2,264,481	-		Pf6N2E2_1910	0.37	+1.0
2,264,482	+		Pf6N2E2_1910	0.37	+0.7
2,264,482	+		Pf6N2E2_1910	0.37	+0.3
2,264,483	-		Pf6N2E2_1910	0.37	+1.0
2,264,483	-		Pf6N2E2_1910	0.37	+2.4
2,264,528	+		Pf6N2E2_1910	0.41	-0.5
2,264,528	+		Pf6N2E2_1910	0.41	-0.5
2,264,528	+		Pf6N2E2_1910	0.41	+1.1
2,264,529	-		Pf6N2E2_1910	0.41	-0.8
2,264,529	-		Pf6N2E2_1910	0.41	-2.1
2,264,529	-		Pf6N2E2_1910	0.41	-0.5
2,264,726	-		Pf6N2E2_1910	0.57	+0.9
2,264,744	+		Pf6N2E2_1910	0.59	+0.6
2,264,744	+		Pf6N2E2_1910	0.59	+0.4
2,264,744	+		Pf6N2E2_1910	0.59	-1.5
2,264,745	-		Pf6N2E2_1910	0.59	+1.7
2,264,802	+		Pf6N2E2_1910	0.64	+0.6
2,264,803	-		Pf6N2E2_1910	0.64	+1.4
2,264,803	-		Pf6N2E2_1910	0.64	+0.5
2,264,836	+		Pf6N2E2_1910	0.66	+1.1
2,264,836	+		Pf6N2E2_1910	0.66	+1.1
2,264,836	+		Pf6N2E2_1910	0.66	+1.0
2,264,837	-		Pf6N2E2_1910	0.67	-0.2
2,264,837	-		Pf6N2E2_1910	0.67	+0.3
2,264,840	+		Pf6N2E2_1910	0.67	+0.4
2,264,840	+		Pf6N2E2_1910	0.67	-2.1
2,264,840	+		Pf6N2E2_1910	0.67	-0.2
2,264,840	+		Pf6N2E2_1910	0.67	+2.1
2,264,840	+		Pf6N2E2_1910	0.67	+1.3
2,264,840	+		Pf6N2E2_1910	0.67	-0.5
2,264,840	+		Pf6N2E2_1910	0.67	+0.8
2,264,840	+		Pf6N2E2_1910	0.67	-1.0
2,264,840	+		Pf6N2E2_1910	0.67	+0.4
2,264,840	+		Pf6N2E2_1910	0.67	-0.4
2,264,840	+		Pf6N2E2_1910	0.67	+0.6
2,264,840	+		Pf6N2E2_1910	0.67	+0.6
2,264,840	+		Pf6N2E2_1910	0.67	+0.1
2,264,840	+		Pf6N2E2_1910	0.67	+0.9
2,264,840	+		Pf6N2E2_1910	0.67	-1.7
2,264,840	+		Pf6N2E2_1910	0.67	-0.9
2,264,840	+		Pf6N2E2_1910	0.67	+0.2
2,264,840	+		Pf6N2E2_1910	0.67	-0.6
2,264,840	+		Pf6N2E2_1910	0.67	-0.3
2,264,840	+		Pf6N2E2_1910	0.67	+1.0
2,264,840	+		Pf6N2E2_1910	0.67	+0.1
2,264,840	+		Pf6N2E2_1910	0.67	+0.9
2,264,841	-		Pf6N2E2_1910	0.67	-0.3
2,264,841	-		Pf6N2E2_1910	0.67	-1.2
2,264,841	-		Pf6N2E2_1910	0.67	+1.8
2,264,841	-		Pf6N2E2_1910	0.67	+0.6
2,264,841	-		Pf6N2E2_1910	0.67	-2.1
2,264,841	-		Pf6N2E2_1910	0.67	+0.7
2,264,943	-		Pf6N2E2_1910	0.75	-0.5
2,264,990	+		Pf6N2E2_1910	0.79	-0.2
2,265,006	+		Pf6N2E2_1910	0.81	+2.1
2,265,006	+		Pf6N2E2_1910	0.81	-0.7
2,265,006	+		Pf6N2E2_1910	0.81	-0.1
2,265,136	-				+1.4
2,265,136	-				+2.0
2,265,168	+				+0.8
2,265,168	+				-0.5
2,265,262	-				+1.1
2,265,262	-				+0.9
2,265,300	+				-2.1
2,265,300	+				+1.0
2,265,300	+				+0.7
2,265,300	+				+0.6
2,265,301	-				+0.8
2,265,316	+				+0.4
2,265,317	-				+0.2
2,265,338	+				+0.1
2,265,339	-				+1.4
2,265,339	-				-0.0
2,265,424	+		Pf6N2E2_1911	0.17	+0.7
2,265,425	-		Pf6N2E2_1911	0.17	+0.4
2,265,425	-		Pf6N2E2_1911	0.17	-0.6
2,265,425	-		Pf6N2E2_1911	0.17	-0.9
2,265,425	-		Pf6N2E2_1911	0.17	+2.4
2,265,559	+		Pf6N2E2_1911	0.32	-0.9
2,265,560	-		Pf6N2E2_1911	0.32	+1.0
2,265,892	-		Pf6N2E2_1911	0.69	+1.2
2,265,923	-		Pf6N2E2_1911	0.72	+1.2
2,265,923	-		Pf6N2E2_1911	0.72	+0.6
2,265,955	+		Pf6N2E2_1911	0.76	+0.5
2,266,040	-		Pf6N2E2_1911	0.85	+1.2
2,266,040	-		Pf6N2E2_1911	0.85	-0.9
2,266,069	-		Pf6N2E2_1911	0.88	-1.8
2,266,145	+				+0.8
2,266,146	-				+0.1
2,266,146	-				-0.8
2,266,234	-				-0.8
2,266,234	-				+0.6
2,266,234	-				+1.2