Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30365 and AO356_30370 are separated by 68 nucleotides AO356_30370 and AO356_30375 are separated by 500 nucleotides
AO356_30365: AO356_30365 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 7,087,170 to 7,088,210
_30365
AO356_30370: AO356_30370 - CoA-binding protein, at 7,088,279 to 7,090,393
_30370
AO356_30375: AO356_30375 - hypothetical protein, at 7,090,894 to 7,091,505
_30375
Position (kb) 7088
7089
7090
7091 Strain fitness (log2 ratio) -1
0
1 at 7087.292 kb on - strand, within AO356_30365 at 7087.365 kb on + strand, within AO356_30365 at 7087.366 kb on - strand, within AO356_30365 at 7087.366 kb on - strand, within AO356_30365 at 7087.398 kb on + strand, within AO356_30365 at 7087.399 kb on - strand, within AO356_30365 at 7087.399 kb on - strand, within AO356_30365 at 7087.399 kb on - strand, within AO356_30365 at 7087.451 kb on - strand, within AO356_30365 at 7087.481 kb on - strand, within AO356_30365 at 7087.488 kb on + strand, within AO356_30365 at 7087.488 kb on + strand, within AO356_30365 at 7087.488 kb on + strand, within AO356_30365 at 7087.684 kb on + strand, within AO356_30365 at 7087.752 kb on - strand, within AO356_30365 at 7087.777 kb on + strand, within AO356_30365 at 7087.777 kb on + strand, within AO356_30365 at 7087.778 kb on - strand, within AO356_30365 at 7087.778 kb on - strand, within AO356_30365 at 7087.889 kb on + strand, within AO356_30365 at 7087.890 kb on - strand, within AO356_30365 at 7088.121 kb on + strand at 7088.122 kb on - strand at 7088.122 kb on - strand at 7088.122 kb on - strand at 7088.240 kb on + strand at 7088.240 kb on + strand at 7088.240 kb on + strand at 7088.328 kb on - strand at 7088.328 kb on - strand at 7088.360 kb on - strand at 7088.550 kb on + strand, within AO356_30370 at 7088.550 kb on + strand, within AO356_30370 at 7088.570 kb on + strand, within AO356_30370 at 7088.571 kb on - strand, within AO356_30370 at 7088.760 kb on - strand, within AO356_30370 at 7088.805 kb on - strand, within AO356_30370 at 7088.952 kb on - strand, within AO356_30370 at 7089.273 kb on - strand, within AO356_30370 at 7089.594 kb on + strand, within AO356_30370 at 7089.595 kb on - strand, within AO356_30370 at 7089.744 kb on + strand, within AO356_30370 at 7089.744 kb on + strand, within AO356_30370 at 7090.015 kb on + strand, within AO356_30370 at 7090.015 kb on + strand, within AO356_30370 at 7090.182 kb on - strand at 7090.248 kb on + strand at 7090.281 kb on + strand at 7090.304 kb on + strand at 7090.305 kb on - strand at 7090.387 kb on + strand at 7090.399 kb on + strand at 7090.400 kb on - strand at 7090.569 kb on + strand at 7090.569 kb on + strand at 7090.690 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.724 kb on + strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.725 kb on - strand at 7090.759 kb on + strand at 7091.000 kb on + strand, within AO356_30375 at 7091.099 kb on - strand, within AO356_30375 at 7091.099 kb on - strand, within AO356_30375 at 7091.123 kb on - strand, within AO356_30375
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 7,087,292 - AO356_30365 0.12 -0.4 7,087,365 + AO356_30365 0.19 +1.0 7,087,366 - AO356_30365 0.19 +0.5 7,087,366 - AO356_30365 0.19 +0.4 7,087,398 + AO356_30365 0.22 +1.1 7,087,399 - AO356_30365 0.22 +0.2 7,087,399 - AO356_30365 0.22 +0.9 7,087,399 - AO356_30365 0.22 -0.6 7,087,451 - AO356_30365 0.27 -1.3 7,087,481 - AO356_30365 0.30 -0.3 7,087,488 + AO356_30365 0.31 +0.7 7,087,488 + AO356_30365 0.31 +0.6 7,087,488 + AO356_30365 0.31 +0.1 7,087,684 + AO356_30365 0.49 +1.5 7,087,752 - AO356_30365 0.56 -0.5 7,087,777 + AO356_30365 0.58 +0.2 7,087,777 + AO356_30365 0.58 -1.7 7,087,778 - AO356_30365 0.58 +0.3 7,087,778 - AO356_30365 0.58 +0.5 7,087,889 + AO356_30365 0.69 +0.6 7,087,890 - AO356_30365 0.69 +0.1 7,088,121 + -1.2 7,088,122 - -1.4 7,088,122 - +1.0 7,088,122 - -0.8 7,088,240 + +0.3 7,088,240 + +0.1 7,088,240 + -0.5 7,088,328 - -1.0 7,088,328 - -0.4 7,088,360 - -0.5 7,088,550 + AO356_30370 0.13 -1.3 7,088,550 + AO356_30370 0.13 +0.2 7,088,570 + AO356_30370 0.14 -0.4 7,088,571 - AO356_30370 0.14 -0.9 7,088,760 - AO356_30370 0.23 +0.3 7,088,805 - AO356_30370 0.25 -0.6 7,088,952 - AO356_30370 0.32 -0.2 7,089,273 - AO356_30370 0.47 -0.4 7,089,594 + AO356_30370 0.62 -0.6 7,089,595 - AO356_30370 0.62 -1.0 7,089,744 + AO356_30370 0.69 -0.4 7,089,744 + AO356_30370 0.69 +0.1 7,090,015 + AO356_30370 0.82 -0.1 7,090,015 + AO356_30370 0.82 -0.1 7,090,182 - +0.6 7,090,248 + +0.4 7,090,281 + +0.2 7,090,304 + -1.0 7,090,305 - -0.2 7,090,387 + -0.0 7,090,399 + +0.1 7,090,400 - -1.0 7,090,569 + -0.9 7,090,569 + -0.6 7,090,690 + -0.3 7,090,724 + -0.7 7,090,724 + +0.4 7,090,724 + +0.8 7,090,724 + -0.2 7,090,724 + -0.1 7,090,724 + +0.6 7,090,725 - +0.1 7,090,725 - +0.1 7,090,725 - -0.6 7,090,725 - -0.9 7,090,725 - +1.4 7,090,725 - +0.1 7,090,725 - -0.0 7,090,725 - +0.1 7,090,759 + +0.9 7,091,000 + AO356_30375 0.17 +0.5 7,091,099 - AO356_30375 0.33 -0.7 7,091,099 - AO356_30375 0.33 +0.3 7,091,123 - AO356_30375 0.37 -0.6
Or see this region's nucleotide sequence