Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29885 and AO356_29890 are separated by 289 nucleotides AO356_29890 and AO356_29895 are separated by 407 nucleotides
AO356_29885: AO356_29885 - chemotaxis protein, at 6,949,436 to 6,950,578
_29885
AO356_29890: AO356_29890 - phosphodiesterase, at 6,950,868 to 6,952,121
_29890
AO356_29895: AO356_29895 - AraC family transcriptional regulator, at 6,952,529 to 6,953,494
_29895
Position (kb)
6950
6951
6952
6953 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6950.600 kb on + strand at 6950.755 kb on - strand at 6950.774 kb on + strand at 6950.787 kb on - strand at 6950.843 kb on + strand at 6951.131 kb on + strand, within AO356_29890 at 6951.131 kb on + strand, within AO356_29890 at 6951.132 kb on - strand, within AO356_29890 at 6951.132 kb on - strand, within AO356_29890 at 6951.132 kb on - strand, within AO356_29890 at 6951.259 kb on + strand, within AO356_29890 at 6951.259 kb on + strand, within AO356_29890 at 6951.260 kb on - strand, within AO356_29890 at 6951.260 kb on - strand, within AO356_29890 at 6951.260 kb on - strand, within AO356_29890 at 6951.260 kb on - strand, within AO356_29890 at 6951.260 kb on - strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.261 kb on + strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.262 kb on - strand, within AO356_29890 at 6951.281 kb on + strand, within AO356_29890 at 6951.317 kb on + strand, within AO356_29890 at 6951.318 kb on - strand, within AO356_29890 at 6951.446 kb on - strand, within AO356_29890 at 6951.558 kb on + strand, within AO356_29890 at 6951.559 kb on - strand, within AO356_29890 at 6951.616 kb on + strand, within AO356_29890 at 6951.616 kb on + strand, within AO356_29890 at 6951.616 kb on + strand, within AO356_29890 at 6951.616 kb on + strand, within AO356_29890 at 6951.617 kb on - strand, within AO356_29890 at 6951.617 kb on - strand, within AO356_29890 at 6951.620 kb on + strand, within AO356_29890 at 6951.620 kb on + strand, within AO356_29890 at 6951.621 kb on - strand, within AO356_29890 at 6951.621 kb on - strand, within AO356_29890 at 6951.621 kb on - strand, within AO356_29890 at 6951.623 kb on - strand, within AO356_29890 at 6951.675 kb on + strand, within AO356_29890 at 6951.676 kb on - strand, within AO356_29890 at 6951.725 kb on + strand, within AO356_29890 at 6952.065 kb on + strand at 6952.078 kb on + strand at 6952.078 kb on + strand at 6952.079 kb on - strand at 6952.079 kb on - strand at 6952.079 kb on - strand at 6952.079 kb on - strand at 6952.139 kb on + strand at 6952.231 kb on + strand at 6952.272 kb on - strand at 6952.275 kb on + strand at 6952.275 kb on + strand at 6952.276 kb on - strand at 6952.280 kb on + strand at 6952.423 kb on + strand at 6952.424 kb on - strand at 6952.489 kb on - strand at 6952.666 kb on + strand, within AO356_29895 at 6952.666 kb on + strand, within AO356_29895 at 6952.704 kb on + strand, within AO356_29895 at 6952.804 kb on + strand, within AO356_29895 at 6952.815 kb on + strand, within AO356_29895 at 6952.816 kb on - strand, within AO356_29895 at 6952.816 kb on - strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.917 kb on + strand, within AO356_29895 at 6952.918 kb on - strand, within AO356_29895 at 6952.918 kb on - strand, within AO356_29895 at 6952.919 kb on + strand, within AO356_29895 at 6952.919 kb on + strand, within AO356_29895
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 6,950,600 + -0.9 6,950,755 - -0.3 6,950,774 + -0.1 6,950,787 - +0.2 6,950,843 + -0.0 6,951,131 + AO356_29890 0.21 +0.2 6,951,131 + AO356_29890 0.21 -0.1 6,951,132 - AO356_29890 0.21 -0.4 6,951,132 - AO356_29890 0.21 +0.5 6,951,132 - AO356_29890 0.21 +1.0 6,951,259 + AO356_29890 0.31 -1.2 6,951,259 + AO356_29890 0.31 -0.8 6,951,260 - AO356_29890 0.31 -0.0 6,951,260 - AO356_29890 0.31 +0.7 6,951,260 - AO356_29890 0.31 -0.4 6,951,260 - AO356_29890 0.31 +0.1 6,951,260 - AO356_29890 0.31 -0.1 6,951,261 + AO356_29890 0.31 +0.2 6,951,261 + AO356_29890 0.31 -0.5 6,951,261 + AO356_29890 0.31 -1.2 6,951,261 + AO356_29890 0.31 -0.1 6,951,261 + AO356_29890 0.31 -0.4 6,951,261 + AO356_29890 0.31 -0.6 6,951,261 + AO356_29890 0.31 -0.5 6,951,261 + AO356_29890 0.31 -0.7 6,951,261 + AO356_29890 0.31 +0.2 6,951,261 + AO356_29890 0.31 -0.1 6,951,261 + AO356_29890 0.31 +0.8 6,951,261 + AO356_29890 0.31 +0.2 6,951,262 - AO356_29890 0.31 +0.9 6,951,262 - AO356_29890 0.31 -0.9 6,951,262 - AO356_29890 0.31 +0.3 6,951,262 - AO356_29890 0.31 -0.5 6,951,262 - AO356_29890 0.31 -0.0 6,951,262 - AO356_29890 0.31 -0.2 6,951,262 - AO356_29890 0.31 -1.5 6,951,281 + AO356_29890 0.33 -0.6 6,951,317 + AO356_29890 0.36 -0.0 6,951,318 - AO356_29890 0.36 +0.4 6,951,446 - AO356_29890 0.46 +0.1 6,951,558 + AO356_29890 0.55 +0.2 6,951,559 - AO356_29890 0.55 -1.8 6,951,616 + AO356_29890 0.60 -0.8 6,951,616 + AO356_29890 0.60 -0.4 6,951,616 + AO356_29890 0.60 -0.9 6,951,616 + AO356_29890 0.60 +0.6 6,951,617 - AO356_29890 0.60 -0.2 6,951,617 - AO356_29890 0.60 +1.8 6,951,620 + AO356_29890 0.60 -0.8 6,951,620 + AO356_29890 0.60 +0.3 6,951,621 - AO356_29890 0.60 -0.2 6,951,621 - AO356_29890 0.60 -0.2 6,951,621 - AO356_29890 0.60 +0.0 6,951,623 - AO356_29890 0.60 +0.3 6,951,675 + AO356_29890 0.64 +0.9 6,951,676 - AO356_29890 0.64 -0.5 6,951,725 + AO356_29890 0.68 -0.1 6,952,065 + -0.5 6,952,078 + -0.1 6,952,078 + -0.5 6,952,079 - -0.8 6,952,079 - +0.2 6,952,079 - +0.3 6,952,079 - +0.4 6,952,139 + -0.7 6,952,231 + +1.4 6,952,272 - +0.1 6,952,275 + +0.9 6,952,275 + -0.4 6,952,276 - -1.2 6,952,280 + -0.4 6,952,423 + -0.4 6,952,424 - +0.6 6,952,489 - -1.0 6,952,666 + AO356_29895 0.14 +0.7 6,952,666 + AO356_29895 0.14 -1.2 6,952,704 + AO356_29895 0.18 -0.7 6,952,804 + AO356_29895 0.28 +0.9 6,952,815 + AO356_29895 0.30 -0.5 6,952,816 - AO356_29895 0.30 -0.3 6,952,816 - AO356_29895 0.30 +0.4 6,952,917 + AO356_29895 0.40 -0.5 6,952,917 + AO356_29895 0.40 -0.4 6,952,917 + AO356_29895 0.40 -0.6 6,952,917 + AO356_29895 0.40 +0.3 6,952,917 + AO356_29895 0.40 -1.3 6,952,917 + AO356_29895 0.40 +0.4 6,952,918 - AO356_29895 0.40 +0.4 6,952,918 - AO356_29895 0.40 +1.2 6,952,919 + AO356_29895 0.40 -0.2 6,952,919 + AO356_29895 0.40 +0.8
Or see this region's nucleotide sequence