Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27010 and AO356_27015 are separated by 146 nucleotides AO356_27015 and AO356_27020 are separated by 14 nucleotides
AO356_27010: AO356_27010 - serine protease, at 6,152,806 to 6,155,898
_27010
AO356_27015: AO356_27015 - peptidase, at 6,156,045 to 6,157,394
_27015
AO356_27020: AO356_27020 - hemolysin D, at 6,157,409 to 6,158,743
_27020
Position (kb)
6156
6157
6158 Strain fitness (log2 ratio)
-1
0
1
2 at 6155.132 kb on + strand, within AO356_27010 at 6155.350 kb on - strand, within AO356_27010 at 6155.546 kb on + strand, within AO356_27010 at 6155.547 kb on - strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.558 kb on + strand, within AO356_27010 at 6155.559 kb on - strand, within AO356_27010 at 6155.781 kb on - strand at 6155.912 kb on + strand at 6155.912 kb on + strand at 6155.912 kb on + strand at 6155.913 kb on - strand at 6155.913 kb on - strand at 6155.913 kb on - strand at 6156.041 kb on + strand at 6156.042 kb on - strand at 6156.121 kb on + strand at 6156.121 kb on + strand at 6156.122 kb on - strand at 6156.122 kb on - strand at 6156.149 kb on - strand at 6156.149 kb on - strand at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.187 kb on + strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.188 kb on - strand, within AO356_27015 at 6156.258 kb on + strand, within AO356_27015 at 6156.386 kb on - strand, within AO356_27015 at 6156.449 kb on - strand, within AO356_27015 at 6156.449 kb on - strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.490 kb on + strand, within AO356_27015 at 6156.502 kb on + strand, within AO356_27015 at 6156.503 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.510 kb on - strand, within AO356_27015 at 6156.639 kb on - strand, within AO356_27015 at 6156.750 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.970 kb on + strand, within AO356_27015 at 6156.971 kb on - strand, within AO356_27015 at 6157.066 kb on + strand, within AO356_27015 at 6157.076 kb on - strand, within AO356_27015 at 6157.114 kb on + strand, within AO356_27015 at 6157.115 kb on - strand, within AO356_27015 at 6157.115 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.199 kb on - strand, within AO356_27015 at 6157.285 kb on + strand at 6157.286 kb on - strand at 6157.286 kb on - strand at 6157.289 kb on + strand at 6157.290 kb on - strand at 6157.316 kb on - strand at 6157.382 kb on - strand at 6157.394 kb on + strand at 6157.411 kb on - strand at 6157.461 kb on + strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.462 kb on - strand at 6157.579 kb on - strand, within AO356_27020 at 6157.582 kb on - strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6157.959 kb on + strand, within AO356_27020 at 6158.076 kb on + strand, within AO356_27020 at 6158.104 kb on - strand, within AO356_27020
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 6,155,132 + AO356_27010 0.75 +0.6 6,155,350 - AO356_27010 0.82 +1.1 6,155,546 + AO356_27010 0.89 +0.7 6,155,547 - AO356_27010 0.89 -0.0 6,155,558 + AO356_27010 0.89 +0.1 6,155,558 + AO356_27010 0.89 -0.6 6,155,558 + AO356_27010 0.89 +1.6 6,155,558 + AO356_27010 0.89 -0.1 6,155,559 - AO356_27010 0.89 -0.4 6,155,781 - +0.2 6,155,912 + -0.2 6,155,912 + +0.5 6,155,912 + +0.7 6,155,913 - +0.2 6,155,913 - +1.9 6,155,913 - +0.0 6,156,041 + +0.5 6,156,042 - -0.6 6,156,121 + -0.6 6,156,121 + -0.4 6,156,122 - +0.6 6,156,122 - +0.1 6,156,149 - -0.4 6,156,149 - -0.3 6,156,187 + AO356_27015 0.11 -1.1 6,156,187 + AO356_27015 0.11 -0.9 6,156,187 + AO356_27015 0.11 -1.7 6,156,187 + AO356_27015 0.11 +0.2 6,156,188 - AO356_27015 0.11 +0.1 6,156,188 - AO356_27015 0.11 +1.2 6,156,188 - AO356_27015 0.11 +0.1 6,156,188 - AO356_27015 0.11 -0.7 6,156,188 - AO356_27015 0.11 -0.3 6,156,258 + AO356_27015 0.16 +0.6 6,156,386 - AO356_27015 0.25 -0.8 6,156,449 - AO356_27015 0.30 +0.6 6,156,449 - AO356_27015 0.30 +0.9 6,156,490 + AO356_27015 0.33 -0.8 6,156,490 + AO356_27015 0.33 +1.2 6,156,502 + AO356_27015 0.34 -1.4 6,156,503 - AO356_27015 0.34 +0.7 6,156,510 - AO356_27015 0.34 -0.4 6,156,510 - AO356_27015 0.34 -0.9 6,156,639 - AO356_27015 0.44 -0.9 6,156,750 + AO356_27015 0.52 +1.4 6,156,970 + AO356_27015 0.69 +1.2 6,156,970 + AO356_27015 0.69 +0.2 6,156,970 + AO356_27015 0.69 -0.4 6,156,971 - AO356_27015 0.69 +0.3 6,157,066 + AO356_27015 0.76 +0.5 6,157,076 - AO356_27015 0.76 +0.9 6,157,114 + AO356_27015 0.79 +0.7 6,157,115 - AO356_27015 0.79 +0.6 6,157,115 - AO356_27015 0.79 -1.0 6,157,199 - AO356_27015 0.85 +1.2 6,157,199 - AO356_27015 0.85 +0.8 6,157,199 - AO356_27015 0.85 +0.8 6,157,285 + +0.2 6,157,286 - +0.5 6,157,286 - -0.2 6,157,289 + +1.0 6,157,290 - -1.6 6,157,316 - -0.2 6,157,382 - +0.8 6,157,394 + -0.0 6,157,411 - +0.4 6,157,461 + +0.3 6,157,462 - +1.1 6,157,462 - +0.6 6,157,462 - -0.0 6,157,462 - -1.4 6,157,579 - AO356_27020 0.13 -0.6 6,157,582 - AO356_27020 0.13 -0.2 6,157,959 + AO356_27020 0.41 +0.7 6,157,959 + AO356_27020 0.41 -0.7 6,157,959 + AO356_27020 0.41 -0.1 6,158,076 + AO356_27020 0.50 -0.1 6,158,104 - AO356_27020 0.52 -0.2
Or see this region's nucleotide sequence