Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26445 and AO356_26450 are separated by 32 nucleotides AO356_26450 and AO356_26455 are separated by 145 nucleotides AO356_26455 and AO356_26460 overlap by 4 nucleotides
AO356_26445: AO356_26445 - FAD-dependent oxidoreductase, at 5,988,387 to 5,989,493
_26445
AO356_26450: AO356_26450 - hypothetical protein, at 5,989,526 to 5,991,073
_26450
AO356_26455: AO356_26455 - hypothetical protein, at 5,991,219 to 5,991,455
_26455
AO356_26460: AO356_26460 - pyridine nucleotide-disulfide oxidoreductase, at 5,991,452 to 5,992,762
_26460
Position (kb)
5989
5990
5991
5992 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5988.602 kb on - strand, within AO356_26445 at 5988.619 kb on + strand, within AO356_26445 at 5988.619 kb on + strand, within AO356_26445 at 5988.620 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.797 kb on - strand, within AO356_26445 at 5988.985 kb on + strand, within AO356_26445 at 5988.986 kb on - strand, within AO356_26445 at 5989.076 kb on - strand, within AO356_26445 at 5989.140 kb on + strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.141 kb on - strand, within AO356_26445 at 5989.235 kb on + strand, within AO356_26445 at 5989.236 kb on - strand, within AO356_26445 at 5989.270 kb on + strand, within AO356_26445 at 5989.328 kb on - strand, within AO356_26445 at 5989.470 kb on + strand at 5989.528 kb on - strand at 5989.894 kb on + strand, within AO356_26450 at 5989.991 kb on + strand, within AO356_26450 at 5989.991 kb on + strand, within AO356_26450 at 5990.431 kb on - strand, within AO356_26450 at 5990.933 kb on - strand at 5991.078 kb on + strand at 5991.203 kb on - strand at 5991.257 kb on - strand, within AO356_26455 at 5991.265 kb on - strand, within AO356_26455 at 5991.479 kb on + strand at 5991.480 kb on - strand at 5991.480 kb on - strand at 5991.586 kb on + strand, within AO356_26460 at 5991.587 kb on - strand, within AO356_26460 at 5991.672 kb on + strand, within AO356_26460 at 5991.672 kb on + strand, within AO356_26460 at 5991.673 kb on - strand, within AO356_26460 at 5991.801 kb on + strand, within AO356_26460 at 5991.802 kb on - strand, within AO356_26460 at 5991.802 kb on - strand, within AO356_26460 at 5991.802 kb on - strand, within AO356_26460 at 5991.802 kb on - strand, within AO356_26460 at 5991.802 kb on - strand, within AO356_26460
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,988,602 - AO356_26445 0.19 -0.7 5,988,619 + AO356_26445 0.21 -1.2 5,988,619 + AO356_26445 0.21 +0.1 5,988,620 - AO356_26445 0.21 +0.5 5,988,797 - AO356_26445 0.37 +1.0 5,988,797 - AO356_26445 0.37 -1.4 5,988,797 - AO356_26445 0.37 +0.2 5,988,985 + AO356_26445 0.54 -0.1 5,988,986 - AO356_26445 0.54 -0.9 5,989,076 - AO356_26445 0.62 +1.2 5,989,140 + AO356_26445 0.68 +0.3 5,989,141 - AO356_26445 0.68 +1.0 5,989,141 - AO356_26445 0.68 -0.4 5,989,141 - AO356_26445 0.68 -0.5 5,989,141 - AO356_26445 0.68 +0.3 5,989,235 + AO356_26445 0.77 +2.0 5,989,236 - AO356_26445 0.77 +0.2 5,989,270 + AO356_26445 0.80 +0.7 5,989,328 - AO356_26445 0.85 -0.0 5,989,470 + -0.8 5,989,528 - +1.4 5,989,894 + AO356_26450 0.24 -1.9 5,989,991 + AO356_26450 0.30 -0.8 5,989,991 + AO356_26450 0.30 -0.7 5,990,431 - AO356_26450 0.58 -0.2 5,990,933 - +0.5 5,991,078 + +0.0 5,991,203 - -0.7 5,991,257 - AO356_26455 0.16 +1.1 5,991,265 - AO356_26455 0.19 -0.8 5,991,479 + -0.4 5,991,480 - +0.7 5,991,480 - +0.1 5,991,586 + AO356_26460 0.10 +0.4 5,991,587 - AO356_26460 0.10 +0.3 5,991,672 + AO356_26460 0.17 +1.1 5,991,672 + AO356_26460 0.17 -0.2 5,991,673 - AO356_26460 0.17 -0.1 5,991,801 + AO356_26460 0.27 -0.1 5,991,802 - AO356_26460 0.27 -1.1 5,991,802 - AO356_26460 0.27 +1.6 5,991,802 - AO356_26460 0.27 -0.1 5,991,802 - AO356_26460 0.27 +0.2 5,991,802 - AO356_26460 0.27 -1.4
Or see this region's nucleotide sequence