Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23925 and AO356_23930 are separated by 331 nucleotides AO356_23930 and AO356_23935 are separated by 88 nucleotides
AO356_23925: AO356_23925 - mRNA 3'-end processing factor, at 5,364,525 to 5,365,880
_23925
AO356_23930: AO356_23930 - molecular chaperone Hsp20, at 5,366,212 to 5,366,751
_23930
AO356_23935: AO356_23935 - arginine-ornithine antiporter, at 5,366,840 to 5,368,333
_23935
Position (kb) 5366
5367 Strain fitness (log2 ratio) -1
0
1 at 5365.288 kb on - strand, within AO356_23925 at 5365.330 kb on - strand, within AO356_23925 at 5365.330 kb on - strand, within AO356_23925 at 5365.368 kb on + strand, within AO356_23925 at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.770 kb on + strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.771 kb on - strand at 5365.988 kb on - strand at 5366.904 kb on - strand at 5366.967 kb on + strand at 5366.989 kb on - strand at 5367.012 kb on + strand, within AO356_23935 at 5367.049 kb on - strand, within AO356_23935 at 5367.109 kb on - strand, within AO356_23935 at 5367.141 kb on + strand, within AO356_23935 at 5367.142 kb on - strand, within AO356_23935 at 5367.142 kb on - strand, within AO356_23935 at 5367.159 kb on + strand, within AO356_23935 at 5367.205 kb on - strand, within AO356_23935 at 5367.410 kb on - strand, within AO356_23935 at 5367.452 kb on + strand, within AO356_23935 at 5367.519 kb on - strand, within AO356_23935 at 5367.519 kb on - strand, within AO356_23935 at 5367.611 kb on + strand, within AO356_23935
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,365,288 - AO356_23925 0.56 +0.3 5,365,330 - AO356_23925 0.59 +0.0 5,365,330 - AO356_23925 0.59 -0.4 5,365,368 + AO356_23925 0.62 -0.2 5,365,770 + -0.2 5,365,770 + +0.0 5,365,770 + -0.6 5,365,770 + -0.4 5,365,770 + -0.4 5,365,771 - -1.2 5,365,771 - +0.4 5,365,771 - -0.4 5,365,771 - -0.4 5,365,988 - -0.1 5,366,904 - -0.8 5,366,967 + +1.0 5,366,989 - +0.1 5,367,012 + AO356_23935 0.12 +0.1 5,367,049 - AO356_23935 0.14 -0.7 5,367,109 - AO356_23935 0.18 +0.4 5,367,141 + AO356_23935 0.20 -0.3 5,367,142 - AO356_23935 0.20 -0.7 5,367,142 - AO356_23935 0.20 +0.3 5,367,159 + AO356_23935 0.21 +0.0 5,367,205 - AO356_23935 0.24 -0.1 5,367,410 - AO356_23935 0.38 -0.5 5,367,452 + AO356_23935 0.41 -0.4 5,367,519 - AO356_23935 0.45 -0.1 5,367,519 - AO356_23935 0.45 -0.0 5,367,611 + AO356_23935 0.52 -0.7
Or see this region's nucleotide sequence