Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_02295 and AO356_02300 are separated by 10 nucleotides AO356_02300 and AO356_02305 are separated by 71 nucleotides AO356_02305 and AO356_02310 are separated by 106 nucleotides AO356_02310 and AO356_02315 are separated by 236 nucleotides
AO356_02295: AO356_02295 - LexA family transcriptional regulator, at 496,975 to 497,583
_02295
AO356_02300: AO356_02300 - CDP-glycerol--UDP-pyrophosphoryl-N- acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase, at 497,594 to 498,067
_02300
AO356_02305: AO356_02305 - hypothetical protein, at 498,139 to 498,372
_02305
AO356_02310: AO356_02310 - PasA protein, at 498,479 to 499,003
_02310
AO356_02315: AO356_02315 - DNA topoisomerase I, at 499,240 to 501,852
_02315
Position (kb) 498
499 Strain fitness (log2 ratio) -1
0
1 at 497.581 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.593 kb on + strand at 497.594 kb on - strand at 497.594 kb on - strand at 498.066 kb on - strand at 498.092 kb on + strand at 498.092 kb on + strand at 498.114 kb on + strand at 498.259 kb on + strand, within AO356_02305 at 498.259 kb on + strand, within AO356_02305 at 498.259 kb on + strand, within AO356_02305 at 498.260 kb on - strand, within AO356_02305 at 498.366 kb on + strand at 498.366 kb on + strand at 498.366 kb on + strand at 498.366 kb on + strand at 498.372 kb on + strand at 498.372 kb on + strand at 498.372 kb on + strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.373 kb on - strand at 498.403 kb on + strand at 498.403 kb on + strand at 498.403 kb on + strand at 498.403 kb on + strand at 498.404 kb on - strand at 498.404 kb on - strand at 498.404 kb on - strand at 498.404 kb on - strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.405 kb on + strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.406 kb on - strand at 498.407 kb on + strand at 498.407 kb on + strand at 498.407 kb on + strand at 498.407 kb on + strand at 498.408 kb on - strand at 498.408 kb on - strand at 498.408 kb on - strand at 498.408 kb on - strand at 498.408 kb on - strand at 498.460 kb on + strand at 498.461 kb on - strand at 498.680 kb on + strand, within AO356_02310 at 498.680 kb on + strand, within AO356_02310 at 498.681 kb on - strand, within AO356_02310 at 498.855 kb on + strand, within AO356_02310 at 498.856 kb on - strand, within AO356_02310 at 498.963 kb on + strand at 498.987 kb on + strand at 498.987 kb on + strand at 498.987 kb on + strand at 498.988 kb on - strand at 499.107 kb on + strand at 499.107 kb on + strand at 499.107 kb on + strand at 499.108 kb on - strand at 499.149 kb on + strand at 499.150 kb on - strand at 499.158 kb on + strand at 499.158 kb on + strand at 499.159 kb on - strand at 499.159 kb on - strand at 499.159 kb on - strand at 499.159 kb on - strand at 499.281 kb on - strand at 499.281 kb on - strand at 499.281 kb on - strand at 499.325 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 497,581 + -0.1 497,593 + +0.5 497,593 + +1.4 497,593 + +0.4 497,593 + -0.5 497,593 + +0.2 497,593 + +0.0 497,593 + -0.4 497,593 + +0.2 497,594 - +0.1 497,594 - +0.4 498,066 - -0.7 498,092 + +1.2 498,092 + +0.0 498,114 + -0.0 498,259 + AO356_02305 0.51 -0.2 498,259 + AO356_02305 0.51 +0.0 498,259 + AO356_02305 0.51 -1.3 498,260 - AO356_02305 0.52 -1.5 498,366 + -0.1 498,366 + +0.2 498,366 + +0.4 498,366 + -0.1 498,372 + +1.6 498,372 + -0.2 498,372 + +0.1 498,373 - -0.5 498,373 - -0.2 498,373 - +0.1 498,373 - +0.8 498,373 - +0.6 498,373 - +1.0 498,373 - -1.2 498,403 + -1.4 498,403 + -0.5 498,403 + +0.5 498,403 + -0.4 498,404 - +1.6 498,404 - +0.1 498,404 - -1.1 498,404 - -0.4 498,405 + +0.2 498,405 + -0.6 498,405 + -1.0 498,405 + -0.2 498,405 + -1.3 498,405 + +0.7 498,405 + +0.1 498,405 + -0.3 498,405 + +0.1 498,406 - -0.0 498,406 - -0.0 498,406 - +0.1 498,406 - +0.3 498,406 - +0.1 498,406 - -0.9 498,406 - +0.5 498,406 - +0.5 498,406 - -0.2 498,406 - -0.5 498,406 - +0.2 498,406 - +0.1 498,406 - -0.3 498,407 + +0.3 498,407 + +0.9 498,407 + -1.1 498,407 + -0.3 498,408 - +0.5 498,408 - +0.2 498,408 - -0.1 498,408 - +0.6 498,408 - -0.1 498,460 + -0.3 498,461 - +0.5 498,680 + AO356_02310 0.38 -0.1 498,680 + AO356_02310 0.38 -0.8 498,681 - AO356_02310 0.38 -0.1 498,855 + AO356_02310 0.72 +0.3 498,856 - AO356_02310 0.72 +1.0 498,963 + +0.8 498,987 + -0.6 498,987 + -1.2 498,987 + -0.1 498,988 - -0.2 499,107 + +0.7 499,107 + +0.9 499,107 + +0.4 499,108 - -0.1 499,149 + -0.5 499,150 - -0.6 499,158 + +0.2 499,158 + +0.6 499,159 - +1.1 499,159 - +0.9 499,159 - +0.1 499,159 - -0.0 499,281 - -0.2 499,281 - +1.0 499,281 - -0.1 499,325 + -0.8
Or see this region's nucleotide sequence