Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3683

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
3,793,739	+		Ga0059261_3681	0.69	+0.1
3,793,739	+		Ga0059261_3681	0.69	+0.5
3,793,739	+		Ga0059261_3681	0.69	+0.2
3,793,739	+		Ga0059261_3681	0.69	+0.3
3,793,739	+		Ga0059261_3681	0.69	+0.2
3,793,739	+		Ga0059261_3681	0.69	-0.6
3,793,740	-		Ga0059261_3681	0.69	+0.4
3,793,740	-		Ga0059261_3681	0.69	+0.5
3,793,740	-		Ga0059261_3681	0.69	+0.3
3,793,847	+		Ga0059261_3681	0.78	+0.1
3,793,847	+		Ga0059261_3681	0.78	-0.2
3,793,848	-		Ga0059261_3681	0.78	+0.2
3,793,974	-		Ga0059261_3681	0.89	-0.3
3,793,979	+		Ga0059261_3681	0.90	+0.7
3,793,979	+		Ga0059261_3681	0.90	-0.1
3,793,979	+		Ga0059261_3681	0.90	-0.7
3,793,980	-		Ga0059261_3681	0.90	-0.2
3,793,980	-		Ga0059261_3681	0.90	+1.1
3,793,980	-		Ga0059261_3681	0.90	-0.2
3,793,991	+				+1.0
3,793,991	+				+0.1
3,793,992	-				-0.4
3,793,992	-				-0.2
3,793,992	-				+1.5
3,794,208	+		Ga0059261_3682	0.23	-0.2
3,794,209	-		Ga0059261_3682	0.23	+0.9
3,794,284	+		Ga0059261_3682	0.41	+0.3
3,794,284	+		Ga0059261_3682	0.41	-0.4
3,794,284	+		Ga0059261_3682	0.41	+0.1
3,794,284	+				+1.6
3,794,284	+		Ga0059261_3682	0.41	-0.3
3,794,284	+		Ga0059261_3682	0.41	-0.1
3,794,284	+		Ga0059261_3682	0.41	+1.4
3,794,285	-		Ga0059261_3682	0.41	-0.7
3,794,285	-		Ga0059261_3682	0.41	-0.2
3,794,285	-		Ga0059261_3682	0.41	-0.7
3,794,285	-		Ga0059261_3682	0.41	+0.1
3,794,285	-		Ga0059261_3682	0.41	+0.7
3,794,285	-		Ga0059261_3682	0.41	+0.8
3,794,285	-		Ga0059261_3682	0.41	-0.9
3,794,285	-		Ga0059261_3682	0.41	-0.5
3,794,359	+		Ga0059261_3682	0.58	-2.9
3,794,359	+		Ga0059261_3682	0.58	+0.3
3,794,359	+		Ga0059261_3682	0.58	-0.4
3,794,360	-		Ga0059261_3682	0.58	-1.1
3,794,360	-		Ga0059261_3682	0.58	-0.9
3,794,360	-		Ga0059261_3682	0.58	+0.1
3,794,360	-		Ga0059261_3682	0.58	-0.3
3,794,360	-		Ga0059261_3682	0.58	+1.1
3,794,533	-				-0.1
3,794,621	+				+0.9
3,794,621	+				-0.7
3,794,621	+				-0.4
3,794,621	+				-0.1
3,794,621	+				+0.1
3,794,622	-				+0.4
3,794,622	-				+0.3
3,794,622	-				+0.5
3,794,622	-				+0.1
3,794,667	-		Ga0059261_3683	0.13	+0.9
3,794,796	+		Ga0059261_3683	0.25	-0.3
3,794,796	+				+2.1
3,794,823	+		Ga0059261_3683	0.28	+1.1
3,794,823	+		Ga0059261_3683	0.28	-0.6
3,794,823	+		Ga0059261_3683	0.28	+0.1
3,794,823	+				+0.1
3,794,824	-		Ga0059261_3683	0.28	-0.5
3,794,824	-		Ga0059261_3683	0.28	-0.6
3,794,824	-		Ga0059261_3683	0.28	-0.7
3,794,898	+		Ga0059261_3683	0.35	-0.2
3,794,899	-		Ga0059261_3683	0.35	+0.1
3,794,918	+		Ga0059261_3683	0.37	-0.3
3,794,918	+		Ga0059261_3683	0.37	-0.5
3,794,918	+		Ga0059261_3683	0.37	-0.4
3,794,979	+		Ga0059261_3683	0.43	-0.5
3,794,980	-		Ga0059261_3683	0.43	-0.0
3,794,980	-				-0.9
3,794,980	-		Ga0059261_3683	0.43	-1.1
3,794,980	-		Ga0059261_3683	0.43	+0.4
3,794,980	-		Ga0059261_3683	0.43	-0.5
3,794,980	-		Ga0059261_3683	0.43	-0.5
3,795,012	+		Ga0059261_3683	0.46	-1.3
3,795,012	+		Ga0059261_3683	0.46	+0.2
3,795,013	-				-0.3
3,795,078	+		Ga0059261_3683	0.52	-0.4
3,795,078	+		Ga0059261_3683	0.52	-0.1
3,795,078	+		Ga0059261_3683	0.52	-0.6
3,795,078	+		Ga0059261_3683	0.52	+1.1
3,795,079	-		Ga0059261_3683	0.52	+0.1
3,795,079	-		Ga0059261_3683	0.52	-0.3
3,795,079	-		Ga0059261_3683	0.52	+0.1
3,795,079	-		Ga0059261_3683	0.52	-0.2
3,795,079	-		Ga0059261_3683	0.52	-1.2
3,795,079	-		Ga0059261_3683	0.52	-0.7
3,795,079	-		Ga0059261_3683	0.52	-0.1
3,795,079	-		Ga0059261_3683	0.52	+1.3
3,795,079	-		Ga0059261_3683	0.52	-0.3
3,795,578	+				-0.1
3,795,578	+				+0.2
3,795,579	-				-0.5
3,795,579	-				-0.2
3,795,599	+				+1.1
3,795,599	+				+1.4
3,795,599	+				-0.3
3,795,599	+				+1.2
3,795,600	-				+0.0
3,795,600	-				-0.0
3,795,600	-				-0.3
3,795,758	+		Ga0059261_3684	0.52	+1.1
3,795,758	+		Ga0059261_3684	0.52	-0.5
3,795,758	+		Ga0059261_3684	0.52	-0.1
3,795,759	-		Ga0059261_3684	0.52	+0.7
3,795,759	-		Ga0059261_3684	0.52	+0.6
3,795,780	-		Ga0059261_3684	0.58	-0.2
3,795,780	-		Ga0059261_3684	0.58	-0.6
3,795,821	+		Ga0059261_3684	0.70	+0.2
3,795,932	-				-0.3
3,795,932	-				-0.8
3,796,159	+		Ga0059261_3685	0.30	+0.6
3,796,159	+		Ga0059261_3685	0.30	-0.8
3,796,159	+		Ga0059261_3685	0.30	-0.2
3,796,159	+		Ga0059261_3685	0.30	-0.5
3,796,159	+		Ga0059261_3685	0.30	-0.7
3,796,159	+		Ga0059261_3685	0.30	+0.2
3,796,159	+		Ga0059261_3685	0.30	-1.3
3,796,159	+		Ga0059261_3685	0.30	-1.8
3,796,159	+		Ga0059261_3685	0.30	-0.5
3,796,159	+		Ga0059261_3685	0.30	-0.7
3,796,159	+		Ga0059261_3685	0.30	-1.9
3,796,159	+				+0.6
3,796,159	+		Ga0059261_3685	0.30	-0.9
3,796,160	-		Ga0059261_3685	0.30	+0.3
3,796,160	-		Ga0059261_3685	0.30	+2.1
3,796,160	-		Ga0059261_3685	0.30	+0.4
3,796,160	-		Ga0059261_3685	0.30	-0.9
3,796,160	-		Ga0059261_3685	0.30	+0.1
3,796,160	-		Ga0059261_3685	0.30	-0.7
3,796,160	-		Ga0059261_3685	0.30	-2.7
3,796,160	-		Ga0059261_3685	0.30	-0.2
3,796,160	-		Ga0059261_3685	0.30	-0.6
3,796,160	-		Ga0059261_3685	0.30	-0.5
3,796,160	-		Ga0059261_3685	0.30	-1.1
3,796,167	+		Ga0059261_3685	0.31	-0.7
3,796,458	+		Ga0059261_3685	0.69	-0.5
3,796,459	-		Ga0059261_3685	0.69	-0.2
3,796,459	-		Ga0059261_3685	0.69	-3.6