Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3568

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
3,693,557	+				-0.3
3,693,557	+				+0.3
3,693,557	+				+0.3
3,693,557	+				-1.7
3,693,557	+				-0.5
3,693,558	-				-0.8
3,693,558	-				+0.5
3,693,558	-				-0.6
3,693,641	-				+0.2
3,693,762	-		Ga0059261_3567	0.25	-1.3
3,693,762	-		Ga0059261_3567	0.25	-0.1
3,693,762	-		Ga0059261_3567	0.25	+1.5
3,693,790	+		Ga0059261_3567	0.28	+0.0
3,693,790	+		Ga0059261_3567	0.28	+0.3
3,693,790	+		Ga0059261_3567	0.28	-0.1
3,693,793	+		Ga0059261_3567	0.29	+0.9
3,693,793	+		Ga0059261_3567	0.29	+0.3
3,693,793	+		Ga0059261_3567	0.29	-0.2
3,693,793	+		Ga0059261_3567	0.29	+0.1
3,693,793	+		Ga0059261_3567	0.29	-0.6
3,693,793	+		Ga0059261_3567	0.29	+0.4
3,693,793	+		Ga0059261_3567	0.29	+0.4
3,693,793	+		Ga0059261_3567	0.29	+0.3
3,693,794	-		Ga0059261_3567	0.29	+0.0
3,693,794	-		Ga0059261_3567	0.29	-0.2
3,693,815	+		Ga0059261_3567	0.32	+0.1
3,693,815	+		Ga0059261_3567	0.32	-0.6
3,693,815	+		Ga0059261_3567	0.32	-0.4
3,693,815	+		Ga0059261_3567	0.32	+0.1
3,693,815	+		Ga0059261_3567	0.32	-0.0
3,693,815	+		Ga0059261_3567	0.32	-0.0
3,693,816	-		Ga0059261_3567	0.32	-0.5
3,693,816	-		Ga0059261_3567	0.32	+1.2
3,693,816	-		Ga0059261_3567	0.32	-1.7
3,693,816	-		Ga0059261_3567	0.32	-0.1
3,693,816	-		Ga0059261_3567	0.32	+0.3
3,693,816	-		Ga0059261_3567	0.32	-1.7
3,693,816	-		Ga0059261_3567	0.32	-0.3
3,693,817	+		Ga0059261_3567	0.32	-0.1
3,693,817	+		Ga0059261_3567	0.32	+0.1
3,693,818	-		Ga0059261_3567	0.32	-0.6
3,693,818	-		Ga0059261_3567	0.32	+0.1
3,694,165	-		Ga0059261_3567	0.76	-0.5
3,694,193	+		Ga0059261_3567	0.80	-0.1
3,694,193	+		Ga0059261_3567	0.80	+1.4
3,694,194	-		Ga0059261_3567	0.80	+0.6
3,694,194	-		Ga0059261_3567	0.80	-0.6
3,694,194	-		Ga0059261_3567	0.80	-0.3
3,694,194	-		Ga0059261_3567	0.80	-0.6
3,694,355	+				-0.6
3,694,394	+				-0.4
3,694,395	-				-0.3
3,694,395	-				-0.4
3,694,401	+				-0.6
3,694,442	-				-0.2
3,694,452	+				-0.2
3,694,452	+				-0.7
3,694,453	-				+0.2
3,694,453	-				+0.0
3,694,470	+				-0.8
3,694,470	+				+1.0
3,694,471	-				+0.8
3,694,501	+				-0.6
3,694,501	+				-0.1
3,694,501	+				+0.5
3,694,501	+				-1.3
3,694,502	-				-0.3
3,694,502	-				-0.5
3,694,502	-				-0.5
3,694,502	-				-0.0
3,694,584	+				+0.9
3,694,584	+				+0.1
3,694,585	-				+1.3
3,694,585	-				-0.0
3,694,585	-				+0.0
3,694,612	-		Ga0059261_3568	0.12	-0.5
3,694,612	-		Ga0059261_3568	0.12	-0.3
3,694,648	+		Ga0059261_3568	0.16	-0.6
3,694,648	+		Ga0059261_3568	0.16	-1.7
3,694,648	+		Ga0059261_3568	0.16	-0.4
3,694,648	+		Ga0059261_3568	0.16	-0.3
3,694,648	+		Ga0059261_3568	0.16	-0.2
3,694,649	-		Ga0059261_3568	0.16	-0.3
3,694,649	-		Ga0059261_3568	0.16	+0.6
3,694,684	+		Ga0059261_3568	0.19	+0.3
3,694,684	+		Ga0059261_3568	0.19	-0.0
3,694,684	+		Ga0059261_3568	0.19	+0.0
3,694,685	-		Ga0059261_3568	0.19	+0.2
3,694,685	-		Ga0059261_3568	0.19	-0.2
3,694,708	+		Ga0059261_3568	0.22	+0.2
3,694,708	+		Ga0059261_3568	0.22	+0.1
3,694,709	-		Ga0059261_3568	0.22	-0.5
3,694,709	-		Ga0059261_3568	0.22	-1.3
3,694,766	-		Ga0059261_3568	0.28	-0.6
3,694,882	+		Ga0059261_3568	0.39	-0.5
3,694,882	+		Ga0059261_3568	0.39	-0.7
3,694,882	+		Ga0059261_3568	0.39	+0.1
3,694,882	+		Ga0059261_3568	0.39	-0.4
3,694,883	-		Ga0059261_3568	0.39	-0.8
3,694,883	-		Ga0059261_3568	0.39	+0.2
3,694,883	-		Ga0059261_3568	0.39	+0.7
3,694,884	+		Ga0059261_3568	0.40	-1.0
3,694,884	+		Ga0059261_3568	0.40	-1.3
3,694,884	+		Ga0059261_3568	0.40	+0.2
3,694,884	+		Ga0059261_3568	0.40	+0.1
3,694,884	+		Ga0059261_3568	0.40	-0.1
3,694,885	-		Ga0059261_3568	0.40	-0.7
3,694,885	-		Ga0059261_3568	0.40	-0.2
3,694,885	-		Ga0059261_3568	0.40	-0.6
3,694,885	-		Ga0059261_3568	0.40	-0.0
3,694,885	-		Ga0059261_3568	0.40	-0.1
3,694,885	-		Ga0059261_3568	0.40	+0.1
3,694,885	-		Ga0059261_3568	0.40	+0.2
3,694,885	-		Ga0059261_3568	0.40	-0.2
3,694,954	+		Ga0059261_3568	0.47	-0.5
3,694,954	+		Ga0059261_3568	0.47	-1.1
3,694,954	+		Ga0059261_3568	0.47	-2.6
3,695,002	+		Ga0059261_3568	0.52	+0.4
3,695,002	+		Ga0059261_3568	0.52	+0.9
3,695,002	+		Ga0059261_3568	0.52	-0.7
3,695,002	+		Ga0059261_3568	0.52	+0.3
3,695,002	+		Ga0059261_3568	0.52	+0.3
3,695,002	+		Ga0059261_3568	0.52	-0.7
3,695,002	+		Ga0059261_3568	0.52	-0.7
3,695,003	-		Ga0059261_3568	0.52	-1.1
3,695,003	-		Ga0059261_3568	0.52	+0.9
3,695,003	-				-1.5
3,695,003	-		Ga0059261_3568	0.52	-0.1
3,695,035	+		Ga0059261_3568	0.55	+0.0
3,695,037	+		Ga0059261_3568	0.55	+0.0
3,695,037	+		Ga0059261_3568	0.55	+0.5
3,695,122	+		Ga0059261_3568	0.64	+0.6
3,695,122	+		Ga0059261_3568	0.64	+0.4
3,695,122	+		Ga0059261_3568	0.64	-0.1
3,695,122	+		Ga0059261_3568	0.64	+0.4
3,695,122	+		Ga0059261_3568	0.64	+0.2
3,695,123	-		Ga0059261_3568	0.64	+0.4
3,695,123	-		Ga0059261_3568	0.64	+1.1
3,695,160	+		Ga0059261_3568	0.67	-2.5
3,695,160	+		Ga0059261_3568	0.67	-0.0
3,695,161	-		Ga0059261_3568	0.68	-1.1
3,695,220	+		Ga0059261_3568	0.74	+0.9
3,695,220	+		Ga0059261_3568	0.74	-0.5
3,695,220	+		Ga0059261_3568	0.74	+0.2
3,695,221	-		Ga0059261_3568	0.74	-0.6
3,695,221	-		Ga0059261_3568	0.74	+0.4
3,695,221	-		Ga0059261_3568	0.74	+0.6
3,695,221	-		Ga0059261_3568	0.74	+1.9
3,695,241	+		Ga0059261_3568	0.76	+0.2
3,695,242	-		Ga0059261_3568	0.76	-0.0
3,695,242	-		Ga0059261_3568	0.76	+0.0
3,695,242	-		Ga0059261_3568	0.76	+0.8
3,695,242	-		Ga0059261_3568	0.76	+0.3
3,695,242	-		Ga0059261_3568	0.76	+0.0
3,695,242	-		Ga0059261_3568	0.76	-0.2
3,695,349	+		Ga0059261_3568	0.87	+0.3
3,695,350	-		Ga0059261_3568	0.87	-0.3
3,695,395	+				+0.2
3,695,395	+				+0.8
3,695,395	+				+0.4
3,695,395	+				-0.8
3,695,395	+				-0.4
3,695,396	-				+0.2
3,695,396	-				+1.1
3,695,396	-				+0.4
3,695,397	+				-0.3
3,695,397	+				+0.0
3,695,397	+				+0.1
3,695,398	-				-0.4
3,695,398	-				-0.9
3,695,398	-				+0.7
3,695,398	-				+0.4
3,695,398	-				+0.7
3,695,446	+				-1.2
3,695,446	+				+0.1
3,695,446	+				-0.2
3,695,447	-				+0.1
3,695,480	-				+0.3
3,695,826	+		Ga0059261_3569	0.29	-3.3
3,695,826	+		Ga0059261_3569	0.29	-2.2
3,695,827	-		Ga0059261_3569	0.29	-2.6
3,695,827	-		Ga0059261_3569	0.29	-1.3