Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3349

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
3,478,102	+		Ga0059261_3348	0.12	-0.4
3,478,102	+		Ga0059261_3348	0.12	-0.1
3,478,102	+		Ga0059261_3348	0.12	-0.4
3,478,102	+		Ga0059261_3348	0.12	+0.6
3,478,102	+		Ga0059261_3348	0.12	-0.1
3,478,102	+		Ga0059261_3348	0.12	-0.8
3,478,103	-		Ga0059261_3348	0.12	+0.5
3,478,103	-		Ga0059261_3348	0.12	+0.6
3,478,103	-		Ga0059261_3348	0.12	+1.1
3,478,103	-		Ga0059261_3348	0.12	-0.1
3,478,103	-		Ga0059261_3348	0.12	-0.5
3,478,238	-		Ga0059261_3348	0.28	-0.2
3,478,238	-		Ga0059261_3348	0.28	-0.1
3,478,246	+		Ga0059261_3348	0.29	+0.7
3,478,247	-		Ga0059261_3348	0.29	+0.1
3,478,247	-		Ga0059261_3348	0.29	-0.6
3,478,247	-		Ga0059261_3348	0.29	+0.0
3,478,289	-		Ga0059261_3348	0.34	+0.4
3,478,447	+		Ga0059261_3348	0.53	+0.3
3,478,447	+		Ga0059261_3348	0.53	+0.3
3,478,448	-		Ga0059261_3348	0.53	+0.3
3,478,448	-		Ga0059261_3348	0.53	+0.1
3,478,501	+		Ga0059261_3348	0.59	+0.6
3,478,501	+		Ga0059261_3348	0.59	+0.2
3,478,501	+		Ga0059261_3348	0.59	-1.1
3,478,501	+		Ga0059261_3348	0.59	-0.7
3,478,501	+		Ga0059261_3348	0.59	-0.0
3,478,501	+		Ga0059261_3348	0.59	+0.8
3,478,501	+		Ga0059261_3348	0.59	-0.5
3,478,502	-		Ga0059261_3348	0.59	+0.2
3,478,502	-		Ga0059261_3348	0.59	-0.1
3,478,502	-		Ga0059261_3348	0.59	+0.3
3,478,502	-		Ga0059261_3348	0.59	+0.2
3,478,502	-		Ga0059261_3348	0.59	+1.8
3,478,502	-		Ga0059261_3348	0.59	-1.9
3,478,502	-		Ga0059261_3348	0.59	+1.2
3,478,566	-		Ga0059261_3348	0.66	+0.5
3,478,566	-		Ga0059261_3348	0.66	-0.7
3,478,567	+		Ga0059261_3348	0.67	+0.5
3,478,567	+		Ga0059261_3348	0.67	-0.2
3,478,567	+		Ga0059261_3348	0.67	+1.1
3,478,568	-		Ga0059261_3348	0.67	+0.5
3,478,630	+		Ga0059261_3348	0.74	-1.1
3,478,630	+		Ga0059261_3348	0.74	+0.7
3,478,630	+		Ga0059261_3348	0.74	-0.2
3,478,631	-		Ga0059261_3348	0.74	-0.4
3,478,631	-		Ga0059261_3348	0.74	-0.7
3,478,631	-		Ga0059261_3348	0.74	+0.5
3,478,631	-		Ga0059261_3348	0.74	+0.5
3,478,631	-		Ga0059261_3348	0.74	-0.0
3,478,654	+		Ga0059261_3348	0.77	+0.2
3,478,654	+		Ga0059261_3348	0.77	+0.8
3,478,654	+		Ga0059261_3348	0.77	+0.1
3,478,655	-		Ga0059261_3348	0.77	-0.9
3,478,655	-		Ga0059261_3348	0.77	-1.9
3,478,655	-		Ga0059261_3348	0.77	+0.6
3,478,726	+		Ga0059261_3348	0.85	-0.1
3,478,726	+		Ga0059261_3348	0.85	-0.0
3,478,727	-		Ga0059261_3348	0.85	+0.9
3,478,727	-		Ga0059261_3348	0.85	-0.7
3,478,727	-		Ga0059261_3348	0.85	+0.6
3,479,136	+		Ga0059261_3349	0.16	-1.5
3,479,136	+		Ga0059261_3349	0.16	-0.2
3,479,136	+		Ga0059261_3349	0.16	+2.1
3,479,136	+		Ga0059261_3349	0.16	-0.5
3,479,136	+		Ga0059261_3349	0.16	-2.0
3,479,136	+				+0.1
3,479,136	+		Ga0059261_3349	0.16	-0.7
3,479,136	+		Ga0059261_3349	0.16	-2.4
3,479,136	+		Ga0059261_3349	0.16	-1.9
3,479,136	+		Ga0059261_3349	0.16	-2.1
3,479,136	+		Ga0059261_3349	0.16	-0.9
3,479,136	+		Ga0059261_3349	0.16	+0.1
3,479,137	-		Ga0059261_3349	0.17	-1.5
3,479,137	-		Ga0059261_3349	0.17	-0.8
3,479,137	-				+0.1
3,479,137	-		Ga0059261_3349	0.17	-1.5
3,479,137	-		Ga0059261_3349	0.17	-0.7
3,479,137	-		Ga0059261_3349	0.17	-1.7
3,479,137	-		Ga0059261_3349	0.17	-0.9
3,479,137	-		Ga0059261_3349	0.17	-0.6
3,479,137	-		Ga0059261_3349	0.17	-0.3
3,479,275	-		Ga0059261_3349	0.25	-0.7
3,479,514	+		Ga0059261_3349	0.38	-0.5
3,479,515	-		Ga0059261_3349	0.38	-0.4
3,479,565	+		Ga0059261_3349	0.41	-1.1
3,479,565	+		Ga0059261_3349	0.41	-0.3
3,479,565	+		Ga0059261_3349	0.41	-1.1
3,479,566	-		Ga0059261_3349	0.41	-1.0
3,479,566	-		Ga0059261_3349	0.41	+0.7
3,479,566	-		Ga0059261_3349	0.41	-1.9
3,479,566	-				-0.9
3,479,566	-		Ga0059261_3349	0.41	-1.7
3,479,583	+		Ga0059261_3349	0.42	-0.2
3,479,583	+		Ga0059261_3349	0.42	-0.8
3,479,583	+		Ga0059261_3349	0.42	-1.1
3,479,583	+		Ga0059261_3349	0.42	-0.8
3,479,583	+		Ga0059261_3349	0.42	-0.9
3,479,583	+		Ga0059261_3349	0.42	-0.5
3,479,583	+		Ga0059261_3349	0.42	-0.8
3,479,583	+		Ga0059261_3349	0.42	-0.5
3,479,583	+		Ga0059261_3349	0.42	-0.2
3,479,584	-		Ga0059261_3349	0.42	+0.8
3,479,584	-		Ga0059261_3349	0.42	-0.6
3,479,584	-				+2.1
3,479,584	-		Ga0059261_3349	0.42	-0.9
3,479,584	-		Ga0059261_3349	0.42	-1.1
3,479,584	-		Ga0059261_3349	0.42	-2.5
3,479,607	+		Ga0059261_3349	0.44	-1.2
3,479,607	+		Ga0059261_3349	0.44	-0.1
3,479,607	+		Ga0059261_3349	0.44	-1.0
3,479,608	-		Ga0059261_3349	0.44	-1.0
3,479,608	-		Ga0059261_3349	0.44	-1.8
3,479,727	+		Ga0059261_3349	0.51	-1.0
3,479,727	+		Ga0059261_3349	0.51	-1.1
3,479,727	+		Ga0059261_3349	0.51	-1.2
3,479,727	+		Ga0059261_3349	0.51	-0.6
3,479,727	+		Ga0059261_3349	0.51	-1.2
3,479,727	+		Ga0059261_3349	0.51	+0.2
3,479,728	-		Ga0059261_3349	0.51	-0.6
3,479,728	-		Ga0059261_3349	0.51	-2.0
3,479,728	-		Ga0059261_3349	0.51	-0.4
3,479,728	-		Ga0059261_3349	0.51	-0.6
3,479,728	-		Ga0059261_3349	0.51	+1.1
3,479,728	-		Ga0059261_3349	0.51	-1.7
3,479,800	+		Ga0059261_3349	0.55	-0.4
3,479,800	+		Ga0059261_3349	0.55	-0.8
3,479,800	+		Ga0059261_3349	0.55	-0.6
3,479,801	-		Ga0059261_3349	0.55	-0.9
3,479,859	+		Ga0059261_3349	0.58	-2.0
3,479,859	+				+1.1
3,479,859	+		Ga0059261_3349	0.58	-0.0
3,479,860	-		Ga0059261_3349	0.58	-1.0
3,479,860	-		Ga0059261_3349	0.58	-1.3
3,479,860	-		Ga0059261_3349	0.58	-0.9
3,479,860	-		Ga0059261_3349	0.58	+0.9
3,479,860	-		Ga0059261_3349	0.58	-0.9
3,479,860	-		Ga0059261_3349	0.58	-0.8
3,479,860	-		Ga0059261_3349	0.58	-0.2
3,479,860	-		Ga0059261_3349	0.58	-1.5
3,479,860	-		Ga0059261_3349	0.58	-0.3
3,479,907	+		Ga0059261_3349	0.61	-1.1
3,479,908	-		Ga0059261_3349	0.61	+0.6
3,479,908	-		Ga0059261_3349	0.61	-2.4
3,479,908	-		Ga0059261_3349	0.61	-0.5
3,479,967	+		Ga0059261_3349	0.64	-2.2
3,479,967	+		Ga0059261_3349	0.64	+0.1
3,480,254	-		Ga0059261_3349	0.81	-1.2
3,480,254	-		Ga0059261_3349	0.81	-2.0
3,480,255	+		Ga0059261_3349	0.81	-0.9
3,480,255	+		Ga0059261_3349	0.81	+0.1
3,480,255	+		Ga0059261_3349	0.81	-0.5
3,480,256	-		Ga0059261_3349	0.81	+1.1
3,480,256	-		Ga0059261_3349	0.81	-2.1
3,480,256	-		Ga0059261_3349	0.81	-0.2
3,480,285	+		Ga0059261_3349	0.83	-1.0
3,480,285	+		Ga0059261_3349	0.83	-1.1
3,480,576	-				-0.5
3,480,742	+				+0.5
3,480,742	+				-0.2
3,480,742	+				-0.5
3,480,742	+				+0.2
3,480,742	+				-1.6
3,480,742	+				+0.2
3,480,743	-				-1.3
3,480,807	-				+0.2
3,480,807	-				+0.1
3,480,807	-				-0.2
3,480,807	-				-0.2
3,480,807	-				+0.3
3,480,830	+				-0.8
3,480,830	+				+0.3
3,480,831	-				-0.2
3,480,994	+		Ga0059261_3350	0.21	+0.4
3,480,995	-		Ga0059261_3350	0.21	+0.0
3,480,995	-		Ga0059261_3350	0.21	+0.7
3,480,995	-		Ga0059261_3350	0.21	+0.1
3,481,057	+		Ga0059261_3350	0.26	+0.6
3,481,057	+		Ga0059261_3350	0.26	-0.5
3,481,057	+		Ga0059261_3350	0.26	-0.4
3,481,057	+		Ga0059261_3350	0.26	-0.2
3,481,057	+		Ga0059261_3350	0.26	+1.1
3,481,057	+		Ga0059261_3350	0.26	-0.8
3,481,057	+		Ga0059261_3350	0.26	-1.3
3,481,057	+		Ga0059261_3350	0.26	-0.4
3,481,057	+		Ga0059261_3350	0.26	-0.3
3,481,058	-		Ga0059261_3350	0.26	-0.2
3,481,058	-		Ga0059261_3350	0.26	+0.1
3,481,058	-		Ga0059261_3350	0.26	+1.1
3,481,058	-		Ga0059261_3350	0.26	+0.2
3,481,058	-		Ga0059261_3350	0.26	+0.3
3,481,058	-		Ga0059261_3350	0.26	+0.7
3,481,058	-		Ga0059261_3350	0.26	+0.6
3,481,058	-		Ga0059261_3350	0.26	+0.5
3,481,058	-		Ga0059261_3350	0.26	-0.1
3,481,123	+		Ga0059261_3350	0.31	+0.2