Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26140 and BWI76_RS26145 overlap by 4 nucleotides BWI76_RS26145 and BWI76_RS26150 are separated by 24 nucleotides BWI76_RS26150 and BWI76_RS26155 are separated by 347 nucleotides
BWI76_RS26140: BWI76_RS26140 - GMP/IMP nucleotidase, at 5,401,220 to 5,401,903
_RS26140
BWI76_RS26145: BWI76_RS26145 - heat-shock protein Hsp15, at 5,401,900 to 5,402,301
_RS26145
BWI76_RS26150: BWI76_RS26150 - molecular chaperone Hsp33, at 5,402,326 to 5,403,204
_RS26150
BWI76_RS26155: BWI76_RS26155 - phosphoenolpyruvate carboxykinase (ATP), at 5,403,552 to 5,405,174
_RS26155
Position (kb) 5402
5403
5404 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5401.350 kb on + strand, within BWI76_RS26140 at 5401.432 kb on + strand, within BWI76_RS26140 at 5401.438 kb on - strand, within BWI76_RS26140 at 5401.440 kb on - strand, within BWI76_RS26140 at 5401.492 kb on - strand, within BWI76_RS26140 at 5401.636 kb on + strand, within BWI76_RS26140 at 5401.850 kb on - strand at 5401.886 kb on + strand at 5402.012 kb on + strand, within BWI76_RS26145 at 5402.020 kb on - strand, within BWI76_RS26145 at 5402.020 kb on - strand, within BWI76_RS26145 at 5402.111 kb on + strand, within BWI76_RS26145 at 5402.477 kb on + strand, within BWI76_RS26150 at 5402.696 kb on - strand, within BWI76_RS26150 at 5402.770 kb on - strand, within BWI76_RS26150 at 5402.838 kb on + strand, within BWI76_RS26150 at 5402.892 kb on - strand, within BWI76_RS26150 at 5403.369 kb on + strand at 5403.414 kb on - strand at 5403.498 kb on - strand at 5403.598 kb on - strand at 5403.598 kb on - strand at 5403.792 kb on + strand, within BWI76_RS26155 at 5403.800 kb on - strand, within BWI76_RS26155 at 5404.074 kb on - strand, within BWI76_RS26155 at 5404.098 kb on - strand, within BWI76_RS26155 at 5404.144 kb on - strand, within BWI76_RS26155
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 5,401,350 + BWI76_RS26140 0.19 +0.6 5,401,432 + BWI76_RS26140 0.31 +1.3 5,401,438 - BWI76_RS26140 0.32 +0.7 5,401,440 - BWI76_RS26140 0.32 -0.4 5,401,492 - BWI76_RS26140 0.40 -0.3 5,401,636 + BWI76_RS26140 0.61 -0.0 5,401,850 - -1.5 5,401,886 + -0.1 5,402,012 + BWI76_RS26145 0.28 -0.4 5,402,020 - BWI76_RS26145 0.30 -0.5 5,402,020 - BWI76_RS26145 0.30 -0.9 5,402,111 + BWI76_RS26145 0.52 +0.3 5,402,477 + BWI76_RS26150 0.17 -2.0 5,402,696 - BWI76_RS26150 0.42 -1.0 5,402,770 - BWI76_RS26150 0.51 -1.9 5,402,838 + BWI76_RS26150 0.58 -3.0 5,402,892 - BWI76_RS26150 0.64 -0.3 5,403,369 + -0.2 5,403,414 - +2.3 5,403,498 - -0.5 5,403,598 - -0.3 5,403,598 - -0.1 5,403,792 + BWI76_RS26155 0.15 -0.2 5,403,800 - BWI76_RS26155 0.15 -0.9 5,404,074 - BWI76_RS26155 0.32 +0.2 5,404,098 - BWI76_RS26155 0.34 -0.4 5,404,144 - BWI76_RS26155 0.36 +0.8
Or see this region's nucleotide sequence