Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23730 and BWI76_RS23735 overlap by 4 nucleotides BWI76_RS23735 and BWI76_RS23740 are separated by 320 nucleotides
BWI76_RS23730: BWI76_RS23730 - glycerate kinase, at 4,954,064 to 4,955,239
_RS23730
BWI76_RS23735: BWI76_RS23735 - sugar diacid utilization regulator, at 4,955,236 to 4,956,393
_RS23735
BWI76_RS23740: BWI76_RS23740 - MFS transporter, at 4,956,714 to 4,958,363
_RS23740
Position (kb)
4955
4956
4957 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4954.401 kb on + strand, within BWI76_RS23730 at 4954.409 kb on - strand, within BWI76_RS23730 at 4954.420 kb on + strand, within BWI76_RS23730 at 4954.568 kb on + strand, within BWI76_RS23730 at 4954.568 kb on + strand, within BWI76_RS23730 at 4954.669 kb on + strand, within BWI76_RS23730 at 4954.677 kb on - strand, within BWI76_RS23730 at 4954.677 kb on - strand, within BWI76_RS23730 at 4954.839 kb on - strand, within BWI76_RS23730 at 4954.900 kb on + strand, within BWI76_RS23730 at 4955.375 kb on - strand, within BWI76_RS23735 at 4955.987 kb on - strand, within BWI76_RS23735 at 4956.149 kb on - strand, within BWI76_RS23735 at 4956.233 kb on - strand, within BWI76_RS23735 at 4956.341 kb on + strand at 4956.383 kb on + strand at 4956.491 kb on - strand at 4956.752 kb on - strand at 4956.855 kb on + strand at 4956.855 kb on + strand at 4956.863 kb on - strand at 4956.863 kb on - strand at 4957.057 kb on + strand, within BWI76_RS23740 at 4957.198 kb on + strand, within BWI76_RS23740 at 4957.208 kb on + strand, within BWI76_RS23740 at 4957.315 kb on - strand, within BWI76_RS23740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,954,401 + BWI76_RS23730 0.29 -0.9 4,954,409 - BWI76_RS23730 0.29 -0.9 4,954,420 + BWI76_RS23730 0.30 -0.4 4,954,568 + BWI76_RS23730 0.43 +1.0 4,954,568 + BWI76_RS23730 0.43 +0.2 4,954,669 + BWI76_RS23730 0.51 -2.6 4,954,677 - BWI76_RS23730 0.52 +0.1 4,954,677 - BWI76_RS23730 0.52 -0.5 4,954,839 - BWI76_RS23730 0.66 -0.1 4,954,900 + BWI76_RS23730 0.71 +0.5 4,955,375 - BWI76_RS23735 0.12 +1.3 4,955,987 - BWI76_RS23735 0.65 +0.2 4,956,149 - BWI76_RS23735 0.79 -1.6 4,956,233 - BWI76_RS23735 0.86 +0.9 4,956,341 + -1.8 4,956,383 + -0.4 4,956,491 - +0.0 4,956,752 - +0.0 4,956,855 + +2.0 4,956,855 + +1.5 4,956,863 - +0.2 4,956,863 - +0.4 4,957,057 + BWI76_RS23740 0.21 +0.1 4,957,198 + BWI76_RS23740 0.29 -1.3 4,957,208 + BWI76_RS23740 0.30 +1.6 4,957,315 - BWI76_RS23740 0.36 -1.8
Or see this region's nucleotide sequence