Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22275 and BWI76_RS22280 are separated by 12 nucleotides BWI76_RS22280 and BWI76_RS22285 are separated by 134 nucleotides
BWI76_RS22275: BWI76_RS22275 - carbamoyltransferase HypF, at 4,642,677 to 4,644,896
_RS22275
BWI76_RS22280: BWI76_RS22280 - formate dehydrogenase-H ferredoxin subunit, at 4,644,909 to 4,645,436
_RS22280
BWI76_RS22285: BWI76_RS22285 - transcriptional regulator, at 4,645,571 to 4,646,584
_RS22285
Position (kb)
4644
4645
4646 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4644.032 kb on + strand, within BWI76_RS22275 at 4644.147 kb on - strand, within BWI76_RS22275 at 4644.471 kb on + strand, within BWI76_RS22275 at 4644.491 kb on - strand, within BWI76_RS22275 at 4644.506 kb on + strand, within BWI76_RS22275 at 4644.569 kb on + strand, within BWI76_RS22275 at 4644.889 kb on - strand at 4644.923 kb on - strand at 4644.923 kb on - strand at 4644.961 kb on - strand at 4644.963 kb on + strand, within BWI76_RS22280 at 4645.001 kb on + strand, within BWI76_RS22280 at 4645.083 kb on - strand, within BWI76_RS22280 at 4645.202 kb on + strand, within BWI76_RS22280 at 4645.225 kb on + strand, within BWI76_RS22280 at 4645.379 kb on + strand, within BWI76_RS22280 at 4645.409 kb on - strand at 4645.770 kb on + strand, within BWI76_RS22285 at 4645.778 kb on - strand, within BWI76_RS22285 at 4645.778 kb on - strand, within BWI76_RS22285 at 4645.789 kb on + strand, within BWI76_RS22285 at 4646.340 kb on + strand, within BWI76_RS22285 at 4646.350 kb on - strand, within BWI76_RS22285 at 4646.357 kb on + strand, within BWI76_RS22285
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 4,644,032 + BWI76_RS22275 0.61 +0.0 4,644,147 - BWI76_RS22275 0.66 -0.5 4,644,471 + BWI76_RS22275 0.81 -2.3 4,644,491 - BWI76_RS22275 0.82 +0.4 4,644,506 + BWI76_RS22275 0.82 -0.4 4,644,569 + BWI76_RS22275 0.85 +0.7 4,644,889 - +0.5 4,644,923 - -0.5 4,644,923 - +0.3 4,644,961 - +1.9 4,644,963 + BWI76_RS22280 0.10 +0.7 4,645,001 + BWI76_RS22280 0.17 +0.6 4,645,083 - BWI76_RS22280 0.33 +0.6 4,645,202 + BWI76_RS22280 0.55 +1.0 4,645,225 + BWI76_RS22280 0.60 +0.5 4,645,379 + BWI76_RS22280 0.89 +0.3 4,645,409 - -0.4 4,645,770 + BWI76_RS22285 0.20 -2.0 4,645,778 - BWI76_RS22285 0.20 +1.0 4,645,778 - BWI76_RS22285 0.20 -0.3 4,645,789 + BWI76_RS22285 0.21 -0.3 4,646,340 + BWI76_RS22285 0.76 +0.7 4,646,350 - BWI76_RS22285 0.77 -0.3 4,646,357 + BWI76_RS22285 0.78 -1.2
Or see this region's nucleotide sequence