Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19365

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19360 and BWI76_RS19365 are separated by 30 nucleotidesBWI76_RS19365 and BWI76_RS19370 are separated by 438 nucleotides BWI76_RS19360: BWI76_RS19360 - glucose dehydrogenase, at 4,034,702 to 4,035,451 _RS19360 BWI76_RS19365: BWI76_RS19365 - ribulokinase, at 4,035,482 to 4,037,089 _RS19365 BWI76_RS19370: BWI76_RS19370 - fructose-bisphosphate aldolase, at 4,037,528 to 4,038,580 _RS19370 Position (kb) 4035 4036 4037 4038Strain fitness (log2 ratio) -2 -1 0 1at 4034.605 kb on + strandat 4034.780 kb on + strand, within BWI76_RS19360at 4035.032 kb on + strand, within BWI76_RS19360at 4035.175 kb on + strand, within BWI76_RS19360at 4035.175 kb on + strand, within BWI76_RS19360at 4035.425 kb on - strandat 4035.452 kb on - strandat 4035.550 kb on - strandat 4035.626 kb on + strandat 4036.078 kb on - strand, within BWI76_RS19365at 4036.213 kb on - strand, within BWI76_RS19365at 4036.947 kb on + strandat 4036.975 kb on + strandat 4037.014 kb on + strandat 4037.014 kb on + strandat 4037.014 kb on + strandat 4037.176 kb on - strandat 4037.176 kb on - strandat 4037.329 kb on - strandat 4037.397 kb on - strandat 4037.408 kb on + strandat 4037.571 kb on + strandat 4037.627 kb on + strandat 4037.820 kb on - strand, within BWI76_RS19370at 4038.028 kb on - strand, within BWI76_RS19370

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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4,034,605 + -0.7
4,034,780 + BWI76_RS19360 0.10 -1.0
4,035,032 + BWI76_RS19360 0.44 -0.1
4,035,175 + BWI76_RS19360 0.63 +0.6
4,035,175 + BWI76_RS19360 0.63 +0.4
4,035,425 - -0.7
4,035,452 - -1.8
4,035,550 - +0.7
4,035,626 + -0.3
4,036,078 - BWI76_RS19365 0.37 -0.6
4,036,213 - BWI76_RS19365 0.45 +0.1
4,036,947 + +0.3
4,036,975 + +0.7
4,037,014 + -0.8
4,037,014 + +0.4
4,037,014 + -0.5
4,037,176 - -0.2
4,037,176 - +0.2
4,037,329 - +0.1
4,037,397 - -0.3
4,037,408 + -0.3
4,037,571 + +1.1
4,037,627 + +0.4
4,037,820 - BWI76_RS19370 0.28 +0.3
4,038,028 - BWI76_RS19370 0.47 +0.3

Or see this region's nucleotide sequence