Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18055 and BWI76_RS18060 are separated by 4 nucleotides BWI76_RS18060 and BWI76_RS18065 are separated by 135 nucleotides BWI76_RS18065 and BWI76_RS18070 are separated by 78 nucleotides BWI76_RS18070 and BWI76_RS18075 are separated by 6 nucleotides
BWI76_RS18055: BWI76_RS18055 - copper resistance protein D, at 3,752,076 to 3,752,945
_RS18055
BWI76_RS18060: BWI76_RS18060 - hypothetical protein, at 3,752,950 to 3,753,324
_RS18060
BWI76_RS18065: BWI76_RS18065 - DNA polymerase III subunit theta, at 3,753,460 to 3,753,690
_RS18065
BWI76_RS18070: BWI76_RS18070 - DNA polymerase III subunit epsilon, at 3,753,769 to 3,754,428
_RS18070
BWI76_RS18075: BWI76_RS18075 - oligopeptidase B, at 3,754,435 to 3,756,495
_RS18075
Position (kb)
3753
3754
3755 Strain fitness (log2 ratio)
-1
0
1
2 at 3752.929 kb on - strand at 3753.135 kb on - strand, within BWI76_RS18060 at 3753.172 kb on + strand, within BWI76_RS18060 at 3753.197 kb on - strand, within BWI76_RS18060 at 3753.367 kb on - strand at 3753.402 kb on + strand at 3753.536 kb on + strand, within BWI76_RS18065 at 3753.590 kb on + strand at 3754.286 kb on + strand, within BWI76_RS18070 at 3754.287 kb on - strand, within BWI76_RS18070 at 3754.293 kb on - strand, within BWI76_RS18070 at 3754.385 kb on + strand at 3754.385 kb on + strand at 3754.447 kb on - strand at 3754.661 kb on - strand, within BWI76_RS18075 at 3754.942 kb on - strand, within BWI76_RS18075 at 3755.332 kb on - strand, within BWI76_RS18075 at 3755.332 kb on - strand, within BWI76_RS18075
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,752,929 - +0.3 3,753,135 - BWI76_RS18060 0.49 -0.2 3,753,172 + BWI76_RS18060 0.59 +1.8 3,753,197 - BWI76_RS18060 0.66 +0.6 3,753,367 - +1.0 3,753,402 + +0.6 3,753,536 + BWI76_RS18065 0.33 -1.0 3,753,590 + +0.1 3,754,286 + BWI76_RS18070 0.78 +1.6 3,754,287 - BWI76_RS18070 0.78 +1.6 3,754,293 - BWI76_RS18070 0.79 +0.6 3,754,385 + -0.5 3,754,385 + -0.9 3,754,447 - +0.2 3,754,661 - BWI76_RS18075 0.11 +0.5 3,754,942 - BWI76_RS18075 0.25 -0.5 3,755,332 - BWI76_RS18075 0.44 +0.1 3,755,332 - BWI76_RS18075 0.44 +1.0
Or see this region's nucleotide sequence