Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15650

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS15640 and BWI76_RS15645 are separated by 3 nucleotidesBWI76_RS15645 and BWI76_RS15650 overlap by 41 nucleotidesBWI76_RS15650 and BWI76_RS15655 are separated by 14 nucleotides BWI76_RS15640: BWI76_RS15640 - hypothetical protein, at 3,268,333 to 3,269,598 _RS15640 BWI76_RS15645: BWI76_RS15645 - gp6, at 3,269,602 to 3,270,528 _RS15645 BWI76_RS15650: BWI76_RS15650 - gp5, at 3,270,488 to 3,271,837 _RS15650 BWI76_RS15655: BWI76_RS15655 - hypothetical protein, at 3,271,852 to 3,273,330 _RS15655 Position (kb) 3270 3271 3272Strain fitness (log2 ratio) -2 -1 0 1at 3269.615 kb on - strandat 3269.616 kb on + strandat 3269.822 kb on + strand, within BWI76_RS15645at 3269.978 kb on + strand, within BWI76_RS15645at 3270.003 kb on + strand, within BWI76_RS15645at 3270.065 kb on - strand, within BWI76_RS15645at 3270.128 kb on - strand, within BWI76_RS15645at 3270.207 kb on + strand, within BWI76_RS15645at 3270.207 kb on + strand, within BWI76_RS15645at 3270.454 kb on - strandat 3270.507 kb on + strandat 3270.612 kb on + strandat 3270.771 kb on - strand, within BWI76_RS15650at 3271.112 kb on + strand, within BWI76_RS15650at 3271.293 kb on + strand, within BWI76_RS15650at 3271.323 kb on - strand, within BWI76_RS15650at 3271.383 kb on - strand, within BWI76_RS15650at 3272.277 kb on + strand, within BWI76_RS15655at 3272.345 kb on - strand, within BWI76_RS15655at 3272.599 kb on - strand, within BWI76_RS15655at 3272.599 kb on - strand, within BWI76_RS15655at 3272.633 kb on - strand, within BWI76_RS15655

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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3,269,615 - -0.8
3,269,616 + +0.3
3,269,822 + BWI76_RS15645 0.24 -0.2
3,269,978 + BWI76_RS15645 0.41 -0.8
3,270,003 + BWI76_RS15645 0.43 +0.2
3,270,065 - BWI76_RS15645 0.50 -0.4
3,270,128 - BWI76_RS15645 0.57 -1.3
3,270,207 + BWI76_RS15645 0.65 -0.1
3,270,207 + BWI76_RS15645 0.65 -1.0
3,270,454 - -2.0
3,270,507 + -0.4
3,270,612 + -0.6
3,270,771 - BWI76_RS15650 0.21 -0.9
3,271,112 + BWI76_RS15650 0.46 -2.6
3,271,293 + BWI76_RS15650 0.60 -1.4
3,271,323 - BWI76_RS15650 0.62 -2.2
3,271,383 - BWI76_RS15650 0.66 -1.4
3,272,277 + BWI76_RS15655 0.29 -0.6
3,272,345 - BWI76_RS15655 0.33 -0.5
3,272,599 - BWI76_RS15655 0.51 -1.2
3,272,599 - BWI76_RS15655 0.51 +0.4
3,272,633 - BWI76_RS15655 0.53 -1.1

Or see this region's nucleotide sequence