Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15345 and BWI76_RS15350 are separated by 149 nucleotides BWI76_RS15350 and BWI76_RS15355 are separated by 67 nucleotides
BWI76_RS15345: BWI76_RS15345 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 3,214,024 to 3,215,127
_RS15345
BWI76_RS15350: BWI76_RS15350 - hypothetical protein, at 3,215,277 to 3,215,669
_RS15350
BWI76_RS15355: BWI76_RS15355 - transcriptional regulator FtrA, at 3,215,737 to 3,216,747
_RS15355
Position (kb)
3215
3216 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3214.451 kb on + strand, within BWI76_RS15345 at 3214.489 kb on + strand, within BWI76_RS15345 at 3214.554 kb on - strand, within BWI76_RS15345 at 3214.844 kb on - strand, within BWI76_RS15345 at 3215.104 kb on + strand at 3215.295 kb on + strand at 3215.297 kb on - strand at 3215.303 kb on - strand at 3215.354 kb on - strand, within BWI76_RS15350 at 3216.042 kb on + strand, within BWI76_RS15355 at 3216.052 kb on + strand, within BWI76_RS15355 at 3216.220 kb on + strand, within BWI76_RS15355 at 3216.228 kb on - strand, within BWI76_RS15355 at 3216.510 kb on - strand, within BWI76_RS15355 at 3216.603 kb on - strand, within BWI76_RS15355 at 3216.604 kb on - strand, within BWI76_RS15355 at 3216.609 kb on - strand at 3216.617 kb on + strand at 3216.617 kb on + strand, within BWI76_RS15355 at 3216.625 kb on - strand, within BWI76_RS15355 at 3216.625 kb on - strand, within BWI76_RS15355 at 3216.625 kb on - strand, within BWI76_RS15355 at 3216.654 kb on + strand at 3216.669 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 3,214,451 + BWI76_RS15345 0.39 +0.7 3,214,489 + BWI76_RS15345 0.42 -1.0 3,214,554 - BWI76_RS15345 0.48 +0.4 3,214,844 - BWI76_RS15345 0.74 +0.6 3,215,104 + -0.4 3,215,295 + +0.0 3,215,297 - +0.2 3,215,303 - -0.0 3,215,354 - BWI76_RS15350 0.20 +0.8 3,216,042 + BWI76_RS15355 0.30 +0.6 3,216,052 + BWI76_RS15355 0.31 +0.5 3,216,220 + BWI76_RS15355 0.48 -0.4 3,216,228 - BWI76_RS15355 0.49 +0.2 3,216,510 - BWI76_RS15355 0.76 -0.4 3,216,603 - BWI76_RS15355 0.86 +1.3 3,216,604 - BWI76_RS15355 0.86 +0.4 3,216,609 - +1.2 3,216,617 + -0.1 3,216,617 + BWI76_RS15355 0.87 -0.2 3,216,625 - BWI76_RS15355 0.88 +0.4 3,216,625 - BWI76_RS15355 0.88 -3.6 3,216,625 - BWI76_RS15355 0.88 -0.0 3,216,654 + -0.1 3,216,669 - -0.5
Or see this region's nucleotide sequence