Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12680

Experiment: D-Salicin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12675 and BWI76_RS12680 are separated by 47 nucleotidesBWI76_RS12680 and BWI76_RS12685 are separated by 16 nucleotides BWI76_RS12675: BWI76_RS12675 - putative UV protection and mutation protein, at 2,642,047 to 2,643,312 _RS12675 BWI76_RS12680: BWI76_RS12680 - oxidoreductase, at 2,643,360 to 2,644,427 _RS12680 BWI76_RS12685: BWI76_RS12685 - DeoR family transcriptional regulator, at 2,644,444 to 2,645,187 _RS12685 Position (kb) 2643 2644 2645Strain fitness (log2 ratio) -3 -2 -1 0 1at 2642.454 kb on + strand, within BWI76_RS12675at 2642.489 kb on - strand, within BWI76_RS12675at 2642.650 kb on + strand, within BWI76_RS12675at 2642.739 kb on + strand, within BWI76_RS12675at 2642.744 kb on + strand, within BWI76_RS12675at 2642.760 kb on + strand, within BWI76_RS12675at 2642.930 kb on - strand, within BWI76_RS12675at 2643.057 kb on - strand, within BWI76_RS12675at 2643.131 kb on + strand, within BWI76_RS12675at 2643.212 kb on - strandat 2643.232 kb on - strandat 2643.366 kb on - strandat 2643.645 kb on + strand, within BWI76_RS12680at 2643.766 kb on + strand, within BWI76_RS12680at 2644.397 kb on + strandat 2644.521 kb on - strand, within BWI76_RS12685at 2645.307 kb on + strandat 2645.348 kb on + strandat 2645.362 kb on + strandat 2645.362 kb on - strandat 2645.370 kb on - strandat 2645.370 kb on - strandat 2645.370 kb on - strandat 2645.386 kb on + strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.394 kb on - strandat 2645.404 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Salicin (C)
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2,642,454 + BWI76_RS12675 0.32 -0.0
2,642,489 - BWI76_RS12675 0.35 -2.6
2,642,650 + BWI76_RS12675 0.48 +0.8
2,642,739 + BWI76_RS12675 0.55 +0.3
2,642,744 + BWI76_RS12675 0.55 +0.6
2,642,760 + BWI76_RS12675 0.56 -0.0
2,642,930 - BWI76_RS12675 0.70 +0.5
2,643,057 - BWI76_RS12675 0.80 +0.6
2,643,131 + BWI76_RS12675 0.86 +0.3
2,643,212 - -0.1
2,643,232 - -2.3
2,643,366 - +0.3
2,643,645 + BWI76_RS12680 0.27 -1.3
2,643,766 + BWI76_RS12680 0.38 -0.8
2,644,397 + +0.9
2,644,521 - BWI76_RS12685 0.10 +1.1
2,645,307 + -3.3
2,645,348 + -1.5
2,645,362 + +0.5
2,645,362 - +0.0
2,645,370 - +1.0
2,645,370 - +1.4
2,645,370 - +0.3
2,645,386 + -2.3
2,645,394 - +1.7
2,645,394 - -0.7
2,645,394 - -1.1
2,645,394 - +0.1
2,645,394 - -1.4
2,645,394 - +0.6
2,645,394 - -1.2
2,645,394 - -1.1
2,645,404 - -0.6

Or see this region's nucleotide sequence