Experiment: D-Salicin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02890 and BWI76_RS02895 overlap by 4 nucleotides BWI76_RS02895 and BWI76_RS02900 are separated by 124 nucleotides
BWI76_RS02890: BWI76_RS02890 - L-seryl-tRNA selenium transferase, at 589,651 to 590,769
_RS02890
BWI76_RS02895: BWI76_RS02895 - hypothetical protein, at 590,766 to 591,506
_RS02895
BWI76_RS02900: BWI76_RS02900 - 6-phosphogluconolactonase, at 591,631 to 592,782
_RS02900
Position (kb) 590
591
592 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 589.932 kb on + strand, within BWI76_RS02890 at 589.971 kb on + strand, within BWI76_RS02890 at 589.971 kb on + strand, within BWI76_RS02890 at 590.493 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.527 kb on + strand, within BWI76_RS02890 at 590.532 kb on + strand, within BWI76_RS02890 at 590.535 kb on - strand, within BWI76_RS02890 at 590.535 kb on - strand, within BWI76_RS02890 at 590.605 kb on + strand, within BWI76_RS02890 at 590.662 kb on - strand at 590.712 kb on + strand at 591.169 kb on - strand, within BWI76_RS02895 at 591.262 kb on + strand, within BWI76_RS02895 at 591.270 kb on - strand, within BWI76_RS02895 at 591.585 kb on + strand at 591.585 kb on + strand at 591.593 kb on - strand at 591.593 kb on - strand at 591.623 kb on - strand at 591.719 kb on - strand at 591.757 kb on - strand, within BWI76_RS02900 at 591.757 kb on - strand, within BWI76_RS02900 at 591.855 kb on - strand, within BWI76_RS02900 at 592.046 kb on + strand, within BWI76_RS02900 at 592.049 kb on - strand, within BWI76_RS02900 at 592.327 kb on + strand, within BWI76_RS02900 at 592.349 kb on + strand, within BWI76_RS02900 at 592.357 kb on - strand, within BWI76_RS02900 at 592.463 kb on - strand, within BWI76_RS02900 at 592.475 kb on + strand, within BWI76_RS02900 at 592.486 kb on + strand, within BWI76_RS02900 at 592.494 kb on - strand, within BWI76_RS02900
Per-strain Table
Position Strand Gene LocusTag Fraction D-Salicin (C) remove 589,932 + BWI76_RS02890 0.25 -0.4 589,971 + BWI76_RS02890 0.29 +0.1 589,971 + BWI76_RS02890 0.29 +1.3 590,493 + BWI76_RS02890 0.75 +1.3 590,527 + BWI76_RS02890 0.78 -1.4 590,527 + BWI76_RS02890 0.78 -1.2 590,527 + BWI76_RS02890 0.78 +1.0 590,527 + BWI76_RS02890 0.78 -0.5 590,527 + BWI76_RS02890 0.78 +0.1 590,527 + BWI76_RS02890 0.78 -0.1 590,532 + BWI76_RS02890 0.79 -2.2 590,535 - BWI76_RS02890 0.79 -0.2 590,535 - BWI76_RS02890 0.79 +0.1 590,605 + BWI76_RS02890 0.85 +0.1 590,662 - -0.4 590,712 + +0.7 591,169 - BWI76_RS02895 0.54 -0.8 591,262 + BWI76_RS02895 0.67 -1.5 591,270 - BWI76_RS02895 0.68 -0.5 591,585 + -2.5 591,585 + -1.3 591,593 - -0.2 591,593 - -0.2 591,623 - +0.7 591,719 - -0.1 591,757 - BWI76_RS02900 0.11 +0.4 591,757 - BWI76_RS02900 0.11 -1.1 591,855 - BWI76_RS02900 0.19 -2.4 592,046 + BWI76_RS02900 0.36 -1.2 592,049 - BWI76_RS02900 0.36 -0.4 592,327 + BWI76_RS02900 0.60 -0.2 592,349 + BWI76_RS02900 0.62 +0.2 592,357 - BWI76_RS02900 0.63 -3.4 592,463 - BWI76_RS02900 0.72 -0.8 592,475 + BWI76_RS02900 0.73 -0.1 592,486 + BWI76_RS02900 0.74 -0.3 592,494 - BWI76_RS02900 0.75 +0.1
Or see this region's nucleotide sequence