Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29070
Experiment: Ceftazidime 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ceftazidime 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,758,916 | + | +0.5 | |||
6,758,917 | - | -0.7 | |||
6,758,946 | - | +0.9 | |||
6,759,449 | - | +0.4 | |||
6,759,449 | - | +0.1 | |||
6,759,629 | - | AO356_29070 | 0.14 | +1.4 | |
6,759,901 | - | AO356_29070 | 0.33 | +0.8 | |
6,759,901 | - | AO356_29070 | 0.33 | +0.6 | |
6,759,901 | - | AO356_29070 | 0.33 | +0.0 | |
6,759,973 | + | AO356_29070 | 0.38 | -2.6 | |
6,759,974 | - | AO356_29070 | 0.38 | -0.7 | |
6,760,479 | + | AO356_29070 | 0.72 | -0.3 | |
6,760,799 | - | -0.1 | |||
6,760,840 | + | -0.3 | |||
6,760,841 | - | -0.5 | |||
6,760,876 | - | -1.3 | |||
6,760,876 | - | +0.3 | |||
6,760,876 | - | +0.0 | |||
6,761,066 | + | AO356_29075 | 0.16 | -0.1 | |
6,761,108 | + | AO356_29075 | 0.20 | -0.5 | |
6,761,337 | - | AO356_29075 | 0.43 | +0.2 | |
6,761,531 | + | AO356_29075 | 0.62 | +0.6 | |
6,761,531 | + | AO356_29075 | 0.62 | -0.1 | |
6,761,531 | + | AO356_29075 | 0.62 | +0.6 |
Or see this region's nucleotide sequence