Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28380
Experiment: Ceftazidime 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ceftazidime 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,600,024 | - | AO356_28375 | 0.55 | +0.3 | |
6,600,068 | + | AO356_28375 | 0.58 | -0.3 | |
6,600,171 | - | AO356_28375 | 0.66 | -0.4 | |
6,600,228 | + | AO356_28375 | 0.70 | -1.2 | |
6,600,389 | + | AO356_28375 | 0.82 | -1.3 | |
6,600,390 | - | AO356_28375 | 0.82 | -0.5 | |
6,600,390 | - | AO356_28375 | 0.82 | +0.4 | |
6,600,452 | + | AO356_28375 | 0.87 | +1.3 | |
6,600,453 | - | AO356_28375 | 0.87 | +0.7 | |
6,600,461 | + | AO356_28375 | 0.88 | +0.3 | |
6,600,462 | - | AO356_28375 | 0.88 | -0.4 | |
6,600,537 | - | +0.0 | |||
6,600,639 | + | +0.8 | |||
6,600,653 | + | +0.6 | |||
6,600,803 | - | +1.6 | |||
6,601,014 | - | AO356_28380 | 0.30 | +0.1 | |
6,601,221 | - | AO356_28380 | 0.49 | -0.8 | |
6,601,256 | - | AO356_28380 | 0.52 | +0.4 | |
6,601,370 | + | AO356_28380 | 0.63 | +0.9 | |
6,601,478 | - | AO356_28380 | 0.73 | +1.7 | |
6,601,490 | + | AO356_28380 | 0.74 | -0.1 | |
6,601,490 | + | AO356_28380 | 0.74 | -1.2 | |
6,601,491 | - | AO356_28380 | 0.74 | +0.8 | |
6,601,821 | + | -0.4 | |||
6,601,895 | - | AO356_28385 | 0.13 | +0.4 | |
6,602,573 | - | -0.3 | |||
6,602,606 | - | -1.2 | |||
6,602,606 | - | +0.5 | |||
6,602,606 | - | -0.5 | |||
6,602,606 | - | -0.2 | |||
6,602,606 | - | -0.2 | |||
6,602,606 | - | +0.6 | |||
6,602,668 | - | -0.3 |
Or see this region's nucleotide sequence