Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21390

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
4,792,862	+				+0.5
4,792,862	+				+0.6
4,792,863	-				+0.3
4,792,863	-				+0.5
4,792,863	-				+0.5
4,792,936	+				+0.6
4,792,936	+				-0.4
4,792,936	+				+0.5
4,792,941	-				+0.0
4,792,941	-				-0.6
4,792,941	-				+0.9
4,793,018	+				-1.0
4,793,018	+				+0.2
4,793,057	-				+1.3
4,793,118	+		AO356_21385	0.23	-0.1
4,793,118	+		AO356_21385	0.23	+0.9
4,793,118	+		AO356_21385	0.23	-0.3
4,793,119	-		AO356_21385	0.23	+0.5
4,793,119	-		AO356_21385	0.23	+0.8
4,793,127	+		AO356_21385	0.25	-0.0
4,793,127	+		AO356_21385	0.25	+0.5
4,793,127	+		AO356_21385	0.25	+0.3
4,793,128	-		AO356_21385	0.25	+0.4
4,793,128	-		AO356_21385	0.25	+0.4
4,793,128	-		AO356_21385	0.25	+1.7
4,793,128	-		AO356_21385	0.25	-0.4
4,793,333	+		AO356_21385	0.71	-0.5
4,793,492	+				+1.0
4,793,492	+				+1.3
4,793,509	+				-1.7
4,793,581	-				+0.7
4,793,589	+				-0.0
4,793,590	-				-1.6
4,793,657	+				+0.2
4,793,784	+				-0.5
4,793,785	-				+0.2
4,793,785	-				+0.8
4,793,894	-		AO356_21390	0.11	+0.9
4,794,366	+		AO356_21390	0.26	-0.0
4,794,366	+		AO356_21390	0.26	+0.7
4,794,618	-		AO356_21390	0.33	-0.1
4,794,823	-		AO356_21390	0.39	+1.0
4,794,955	+		AO356_21390	0.44	+0.8
4,794,956	-		AO356_21390	0.44	-0.3
4,795,049	+		AO356_21390	0.46	+0.3
4,795,050	-		AO356_21390	0.46	+0.9
4,795,050	-		AO356_21390	0.46	+0.2
4,795,063	+		AO356_21390	0.47	+0.4
4,795,063	+		AO356_21390	0.47	-0.6
4,795,063	+		AO356_21390	0.47	-0.5
4,795,064	-		AO356_21390	0.47	+0.4
4,795,064	-		AO356_21390	0.47	+0.9
4,795,064	-		AO356_21390	0.47	+0.3
4,795,064	-		AO356_21390	0.47	+0.4
4,795,128	+		AO356_21390	0.49	-0.6
4,795,129	-		AO356_21390	0.49	-0.3
4,795,693	-		AO356_21390	0.66	+1.1
4,795,718	+		AO356_21390	0.67	+0.0
4,795,718	+		AO356_21390	0.67	-1.5
4,795,718	+		AO356_21390	0.67	+1.3
4,795,719	-		AO356_21390	0.67	+0.0
4,795,725	+		AO356_21390	0.67	+0.8
4,795,737	+		AO356_21390	0.67	+0.8
4,795,737	+		AO356_21390	0.67	-0.1
4,795,737	+		AO356_21390	0.67	+0.4
4,795,738	-		AO356_21390	0.67	-0.4
4,795,738	-		AO356_21390	0.67	-1.0
4,795,738	-		AO356_21390	0.67	-0.6
4,795,738	-		AO356_21390	0.67	+0.9
4,796,029	-		AO356_21390	0.76	-0.1
4,796,029	-		AO356_21390	0.76	-0.1
4,796,219	+		AO356_21390	0.82	-0.4
4,796,219	+		AO356_21390	0.82	-0.2
4,796,219	+		AO356_21390	0.82	-0.2
4,796,220	-		AO356_21390	0.82	-0.2
4,796,247	+		AO356_21390	0.83	-0.5
4,796,247	+		AO356_21390	0.83	+1.2
4,796,247	+		AO356_21390	0.83	+0.4
4,796,248	-		AO356_21390	0.83	-0.1
4,796,248	-		AO356_21390	0.83	+0.8
4,796,426	+		AO356_21390	0.88	-0.2
4,796,578	-				-0.1
4,796,578	-				+1.6
4,796,837	+				+0.2
4,796,837	+				-0.5
4,796,837	+				-0.7
4,796,837	+				+0.2
4,796,838	-				-0.5
4,796,838	-				-1.2
4,796,877	+				-0.1
4,796,877	+				-0.2
4,796,877	+				-0.8
4,796,877	+				-0.6
4,796,877	+				-0.1
4,796,877	+				+0.3
4,796,878	-				+1.2
4,796,878	-				+0.2
4,796,878	-				-0.2
4,796,915	+				+0.6
4,796,916	-				-1.3
4,796,968	+		AO356_21395	0.10	+0.4
4,796,968	+		AO356_21395	0.10	-0.0
4,796,968	+		AO356_21395	0.10	+0.4
4,796,968	+		AO356_21395	0.10	+2.2
4,796,968	+		AO356_21395	0.10	+0.1
4,796,968	+		AO356_21395	0.10	-0.2
4,796,968	+		AO356_21395	0.10	+0.3
4,796,969	-		AO356_21395	0.10	-0.2
4,796,969	-		AO356_21395	0.10	+1.6
4,796,969	-		AO356_21395	0.10	-0.3
4,796,969	-		AO356_21395	0.10	+1.0
4,796,969	-		AO356_21395	0.10	+0.1
4,796,970	+		AO356_21395	0.11	+0.4
4,796,970	+		AO356_21395	0.11	+0.5
4,796,970	+		AO356_21395	0.11	+0.5
4,796,970	+		AO356_21395	0.11	+0.3
4,796,970	+		AO356_21395	0.11	+1.3
4,796,971	-		AO356_21395	0.11	+0.1
4,796,971	-		AO356_21395	0.11	-0.0
4,796,971	-		AO356_21395	0.11	+0.4
4,796,975	+		AO356_21395	0.11	+1.1
4,796,975	+		AO356_21395	0.11	+1.0
4,796,975	+		AO356_21395	0.11	-0.6
4,796,993	+		AO356_21395	0.13	+0.3
4,796,993	+		AO356_21395	0.13	+0.3
4,796,994	-		AO356_21395	0.13	+0.5
4,796,994	-		AO356_21395	0.13	-0.6
4,796,994	-		AO356_21395	0.13	-0.0
4,797,096	+		AO356_21395	0.25	+0.6
4,797,097	-		AO356_21395	0.25	+1.3
4,797,299	+		AO356_21395	0.47	+0.3
4,797,299	+		AO356_21395	0.47	+0.5
4,797,369	+		AO356_21395	0.55	+0.5
4,797,370	-		AO356_21395	0.55	-0.0
4,797,440	+		AO356_21395	0.63	+0.4
4,797,440	+		AO356_21395	0.63	+1.2
4,797,440	+		AO356_21395	0.63	+0.5
4,797,440	+		AO356_21395	0.63	-0.5
4,797,441	-		AO356_21395	0.63	-0.5
4,797,739	+				+0.2
4,797,740	-				+0.1