Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11405

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
2,585,696	+		AO356_11400	0.80	+0.3
2,585,696	+		AO356_11400	0.80	+0.6
2,585,696	+		AO356_11400	0.80	+0.4
2,585,696	+		AO356_11400	0.80	-0.1
2,585,697	-		AO356_11400	0.81	-0.3
2,585,697	-		AO356_11400	0.81	-0.0
2,585,697	-		AO356_11400	0.81	+0.9
2,585,697	-		AO356_11400	0.81	-0.3
2,585,939	-				+0.9
2,585,939	-				+0.9
2,585,939	-				+0.2
2,585,939	-				-1.6
2,585,955	+				+1.5
2,585,955	+				+0.3
2,585,955	+				+0.6
2,585,967	+				+0.2
2,585,967	+				-0.2
2,585,967	+				-0.1
2,585,967	+				-0.1
2,585,968	-				-0.9
2,585,968	-				+0.8
2,585,968	-				+0.4
2,585,968	-				+0.3
2,586,039	+				+0.3
2,586,039	+				+0.3
2,586,039	+				-0.4
2,586,039	+				-0.0
2,586,039	+				+0.0
2,586,039	+				+1.3
2,586,040	-				+1.1
2,586,040	-				+0.1
2,586,040	-				-1.2
2,586,040	-				+0.9
2,586,041	+				-0.7
2,586,041	+				-0.1
2,586,041	+				+1.5
2,586,041	+				+0.3
2,586,041	+				+1.5
2,586,041	+				+0.6
2,586,041	+				-0.5
2,586,041	+				+0.1
2,586,042	-				-1.6
2,586,042	-				-1.9
2,586,042	-				+2.2
2,586,042	-				+0.8
2,586,042	-				+0.3
2,586,042	-				-2.4
2,586,042	-				-1.1
2,586,042	-				+1.8
2,586,042	-				-0.3
2,586,070	-				-0.3
2,586,070	-				+0.2
2,586,095	+				-0.5
2,586,095	+				-1.0
2,586,096	-				+0.9
2,586,096	-				-0.6
2,586,096	-				+2.2
2,586,182	+				-0.9
2,586,182	+				-0.6
2,586,182	+				-0.8
2,586,183	-				-0.4
2,586,183	-				-0.5
2,586,216	+				+0.7
2,586,216	+				+0.2
2,586,216	+				-0.5
2,586,216	+				+0.0
2,586,216	+				-0.4
2,586,216	+				-0.7
2,586,216	+				+1.8
2,586,216	+				+1.7
2,586,216	+				+0.2
2,586,216	+				+0.8
2,586,216	+				+1.5
2,586,216	+				+0.8
2,586,216	+				-0.4
2,586,217	-				-1.9
2,586,217	-				-1.3
2,586,217	-				-0.4
2,586,217	-				+0.7
2,586,217	-				+0.5
2,586,217	-				-1.1
2,586,217	-				-1.1
2,586,217	-				+0.6
2,586,217	-				-0.0
2,586,244	+				+0.1
2,586,245	-				+0.4
2,586,245	-				-0.0
2,586,245	-				+0.3
2,586,245	-				+0.4
2,586,339	+				+1.0
2,586,339	+				-0.7
2,586,339	+				-0.6
2,586,339	+				-0.0
2,586,339	+				-1.0
2,586,339	+				-0.3
2,586,339	+				-0.9
2,586,340	-				-0.3
2,586,340	-				-1.3
2,586,340	-				+0.2
2,586,340	-				-0.5
2,586,340	-				+0.1
2,586,340	-				+0.4
2,586,340	-				+0.2
2,586,340	-				-0.4
2,586,340	-				+0.3
2,586,357	-				-0.7
2,586,359	+				-0.6
2,586,359	+				-1.6
2,586,359	+				+0.4
2,586,457	+				-1.2
2,586,457	+				+0.3
2,586,457	+				-0.3
2,586,457	+				-0.1
2,586,458	-				-0.6
2,586,458	-				+1.0
2,586,509	+				+1.0
2,586,510	-				+1.2
2,586,548	+				+0.9
2,586,662	+				-1.4
2,586,662	+				-0.9
2,586,663	-				+1.6
2,586,708	+		AO356_11405	0.11	+0.1
2,586,709	-		AO356_11405	0.11	-0.6
2,586,709	-		AO356_11405	0.11	+0.6
2,586,803	+		AO356_11405	0.31	+1.8
2,586,890	+		AO356_11405	0.50	+0.8
2,586,890	+		AO356_11405	0.50	+1.0
2,586,890	+		AO356_11405	0.50	-0.7
2,586,891	-		AO356_11405	0.50	-1.4
2,586,891	-		AO356_11405	0.50	-0.1
2,586,891	-		AO356_11405	0.50	+0.3
2,586,891	-		AO356_11405	0.50	-0.7
2,586,891	-		AO356_11405	0.50	+0.4
2,586,891	-		AO356_11405	0.50	+0.1
2,586,891	-		AO356_11405	0.50	+0.5
2,586,891	-		AO356_11405	0.50	+0.4
2,587,005	-		AO356_11405	0.75	+1.2
2,587,163	+				+1.3
2,587,164	-				-0.5
2,587,223	+				-0.4
2,587,239	+				-0.2
2,587,271	+				-0.1
2,587,271	+				-0.4
2,587,271	+				-0.3
2,587,271	+				+0.3
2,587,271	+				-1.1
2,587,271	+				+0.9
2,587,271	+				+0.3
2,587,272	-				+1.8
2,587,272	-				-0.3
2,587,272	-				+0.9
2,587,312	+				-0.5
2,587,313	-				+0.2
2,587,316	+				+0.2
2,587,316	+				-0.4
2,587,316	+				-1.2
2,587,316	+				+2.8
2,587,316	+				+0.3
2,587,316	+				+0.3
2,587,317	-				+1.0
2,587,317	-				-2.4
2,587,317	-				+0.6
2,587,317	-				-0.4
2,587,317	-				+0.4
2,587,317	-				+0.6
2,587,361	+				-0.1
2,587,361	+				+0.5
2,587,361	+				-1.3
2,587,361	+				-0.4
2,587,362	-				-0.3
2,587,362	-				+0.2
2,587,372	-				+1.0
2,587,596	-		AO356_11410	0.79	+1.0
2,587,596	-		AO356_11410	0.79	-0.6
2,587,702	+				-0.6
2,587,702	+				-1.2
2,587,702	+				-0.8
2,587,703	-				+0.6
2,587,703	-				+0.9
2,587,703	-				+0.6
2,587,749	-				+0.3
2,587,756	-				-0.1
2,587,783	-				+0.0
2,587,869	+				-0.7
2,587,869	+				-1.8
2,587,869	+				-0.4
2,587,870	-				-0.1
2,587,870	-				+1.4
2,587,870	-				+0.8
2,587,870	-				-0.3
2,587,870	-				-0.4
2,587,936	+				-0.4
2,587,937	-				+0.3
2,587,937	-				+1.8
2,587,937	-				+0.1
2,587,945	+				+0.1
2,587,972	+				-0.1
2,587,987	+				-0.4
2,588,008	+				-0.5
2,588,008	+				-0.0
2,588,011	+				+1.5
2,588,011	+				+0.9
2,588,011	+				-0.3
2,588,083	+				+0.6
2,588,083	+				-0.1
2,588,084	-				+0.7
2,588,084	-				-0.8
2,588,084	-				+1.3
2,588,084	-				+0.6