Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11250

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
2,549,949	+		AO356_11245	0.14	-0.4
2,549,949	+		AO356_11245	0.14	+0.9
2,549,949	+		AO356_11245	0.14	-0.1
2,549,949	+		AO356_11245	0.14	+0.6
2,549,949	+		AO356_11245	0.14	-0.0
2,549,949	+		AO356_11245	0.14	-0.5
2,549,949	+		AO356_11245	0.14	+0.4
2,549,950	-		AO356_11245	0.14	-0.2
2,549,950	-		AO356_11245	0.14	-0.8
2,549,950	-		AO356_11245	0.14	-0.1
2,550,174	-		AO356_11245	0.69	+1.6
2,550,256	+		AO356_11245	0.89	-0.8
2,550,257	-		AO356_11245	0.89	-0.5
2,550,332	+				+0.6
2,550,332	+				-1.4
2,550,332	+				+0.2
2,550,332	+				+0.4
2,550,333	-				-1.5
2,550,333	-				+0.3
2,550,333	-				-0.1
2,550,333	-				+0.3
2,550,333	-				-0.5
2,550,333	-				+1.1
2,550,333	-				-0.8
2,550,333	-				-0.5
2,550,333	-				+0.6
2,550,333	-				-1.0
2,550,333	-				-0.2
2,550,333	-				+0.2
2,550,333	-				-0.1
2,550,333	-				-0.2
2,550,333	-				-0.0
2,550,333	-				-0.6
2,550,333	-				+0.8
2,550,334	+				+0.1
2,550,334	+				-0.9
2,550,334	+				+0.4
2,550,334	+				-0.4
2,550,334	+				+0.7
2,550,335	-				+0.1
2,550,335	-				+0.4
2,550,360	-				+0.4
2,550,360	-				-0.4
2,550,360	-				+0.1
2,550,360	-				-0.6
2,550,459	+				+0.1
2,550,459	+				+0.6
2,550,459	+				+1.0
2,550,459	+				-0.9
2,550,459	+				+0.5
2,550,460	-				+1.5
2,550,460	-				+0.4
2,550,463	+				+0.6
2,550,463	+				-0.1
2,550,463	+				+0.3
2,550,463	+				+0.1
2,550,463	+				+1.4
2,550,463	+				+1.6
2,550,464	-				-0.2
2,550,464	-				-0.2
2,550,464	-				-0.0
2,550,464	-				-0.3
2,550,478	-				-0.1
2,550,478	-				+0.6
2,550,478	-				+0.5
2,550,478	-				-0.1
2,550,478	-				-1.3
2,550,496	+				+0.8
2,550,496	+				-0.4
2,550,496	+				+0.6
2,550,509	+				-0.6
2,550,509	+				-0.1
2,550,510	-				-0.9
2,550,537	+				+0.1
2,550,537	+				-0.5
2,550,538	-				-0.2
2,550,538	-				+0.5
2,550,595	+				+0.3
2,550,595	+				+0.6
2,550,596	-				+0.3
2,550,650	-				-0.5
2,550,680	-				-0.6
2,550,717	-				-0.2
2,550,773	-				+0.1
2,551,086	-		AO356_11250	0.16	+0.5
2,551,090	+		AO356_11250	0.17	-0.1
2,551,114	+		AO356_11250	0.19	+1.4
2,551,135	-		AO356_11250	0.21	+1.0
2,551,267	+		AO356_11250	0.35	+0.8
2,551,323	+		AO356_11250	0.40	+0.6
2,551,367	+		AO356_11250	0.45	+0.2
2,551,368	-		AO356_11250	0.45	+0.3
2,551,425	-		AO356_11250	0.51	+0.3
2,551,540	-		AO356_11250	0.63	-0.0
2,551,596	+		AO356_11250	0.68	+0.8
2,551,597	-		AO356_11250	0.69	+1.6
2,551,635	+		AO356_11250	0.72	-0.9
2,551,636	-		AO356_11250	0.73	+0.7
2,551,636	-		AO356_11250	0.73	-0.8
2,551,636	-		AO356_11250	0.73	+0.1
2,551,639	+		AO356_11250	0.73	-0.2
2,551,641	+		AO356_11250	0.73	-0.3
2,551,641	+		AO356_11250	0.73	+0.6
2,551,666	+		AO356_11250	0.76	-0.4
2,551,701	+		AO356_11250	0.79	+1.0
2,551,716	+		AO356_11250	0.81	-1.1
2,551,855	-				+0.1
2,551,875	-				-0.9
2,551,875	-				+0.6
2,552,114	+		AO356_11255	0.23	-0.8
2,552,163	+		AO356_11255	0.28	-0.4
2,552,165	+		AO356_11255	0.28	-0.6
2,552,165	+		AO356_11255	0.28	+0.8
2,552,166	-		AO356_11255	0.28	+0.5
2,552,166	-		AO356_11255	0.28	-0.6
2,552,166	-		AO356_11255	0.28	+1.1
2,552,222	-		AO356_11255	0.35	-0.0
2,552,227	+		AO356_11255	0.35	+1.4
2,552,228	-		AO356_11255	0.35	+0.3
2,552,538	-		AO356_11255	0.69	-0.1
2,552,571	-		AO356_11255	0.73	+0.7
2,552,578	+		AO356_11255	0.74	-0.6
2,552,607	-		AO356_11255	0.77	-1.3
2,552,611	+		AO356_11255	0.77	+0.0
2,552,612	-		AO356_11255	0.78	-0.3
2,552,613	+		AO356_11255	0.78	-0.3
2,552,613	+		AO356_11255	0.78	+1.2
2,552,613	+		AO356_11255	0.78	-1.0
2,552,673	+		AO356_11255	0.84	-0.2
2,552,724	+		AO356_11255	0.90	+0.4
2,552,773	+				+0.3
2,552,773	+				+0.4
2,552,774	-				+0.3