Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08540

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
1,919,450	+				+0.2
1,919,457	-				-0.8
1,919,473	+				+0.6
1,919,474	-				-0.2
1,919,474	-				-1.0
1,919,474	-				+1.3
1,919,491	+				-0.1
1,919,491	+				-0.4
1,919,491	+				-1.3
1,919,491	+				-0.9
1,919,492	-				-0.2
1,919,492	-				-1.5
1,919,504	+				+0.4
1,919,504	+				+0.0
1,919,504	+				-0.4
1,919,504	+				-1.7
1,919,505	-				-0.1
1,919,505	-				-0.5
1,919,505	-				+0.8
1,919,550	+				+0.0
1,919,558	+				-0.3
1,919,558	+				+1.2
1,919,578	+				+0.7
1,919,602	+				+1.3
1,919,602	+				-0.1
1,919,602	+				-0.3
1,919,602	+				-0.6
1,919,603	-				-1.2
1,919,603	-				-0.1
1,919,603	-				-0.3
1,919,626	+				+0.5
1,919,626	+				-1.1
1,919,626	+				-0.3
1,919,626	+				-0.3
1,919,626	+				+0.5
1,919,626	+				-1.0
1,919,627	-				-1.3
1,919,644	+				+0.6
1,919,645	-				-0.2
1,919,645	-				-1.9
1,919,645	-				+0.9
1,919,645	-				-0.3
1,919,656	+				+0.2
1,919,657	-				-1.5
1,919,657	-				+0.3
1,919,684	+				-1.4
1,919,684	+				-0.2
1,919,684	+				+0.5
1,919,685	-				+0.3
1,919,685	-				+0.3
1,919,685	-				+0.3
1,919,685	-				-0.3
1,919,747	+				+0.0
1,919,747	+				+0.1
1,919,748	-				-1.1
1,920,110	+		AO356_08535	0.71	+0.1
1,920,139	+		AO356_08535	0.76	-0.8
1,920,139	+		AO356_08535	0.76	-0.9
1,920,139	+		AO356_08535	0.76	-1.5
1,920,139	+		AO356_08535	0.76	+1.0
1,920,140	-		AO356_08535	0.77	+0.8
1,920,140	-		AO356_08535	0.77	+0.0
1,920,243	+				+1.2
1,920,243	+				-0.1
1,920,244	-				+1.0
1,920,244	-				-0.4
1,920,304	+				+0.9
1,920,304	+				+0.5
1,920,305	-				-0.6
1,920,305	-				+0.1
1,920,305	-				-0.6
1,920,305	-				+0.7
1,920,361	+				-0.5
1,920,361	+				+0.2
1,920,361	+				-0.6
1,920,361	+				-0.4
1,920,362	-				-0.5
1,920,362	-				+0.9
1,920,362	-				-0.3
1,920,362	-				-0.3
1,920,362	-				-0.3
1,920,482	+		AO356_08540	0.72	+0.3
1,920,483	-		AO356_08540	0.72	-0.8
1,920,483	-		AO356_08540	0.72	+0.6
1,920,483	-		AO356_08540	0.72	+1.0
1,920,483	-		AO356_08540	0.72	+0.1
1,920,609	+				+0.0
1,920,609	+				+1.0
1,920,609	+				+0.5
1,920,609	+				+0.2
1,920,609	+				+0.2
1,920,609	+				-1.6
1,920,609	+				+0.0
1,920,610	-				+0.9
1,920,610	-				+0.5
1,920,628	+				+2.1
1,920,748	-		AO356_08545	0.37	+1.0
1,920,748	-		AO356_08545	0.37	-0.7
1,920,792	+		AO356_08545	0.49	-1.0
1,920,792	+		AO356_08545	0.49	+0.4
1,920,792	+		AO356_08545	0.49	+0.8
1,920,792	+		AO356_08545	0.49	+0.7
1,920,793	-		AO356_08545	0.49	+0.6
1,921,003	-				-0.1
1,921,010	+				+1.1
1,921,010	+				-0.3
1,921,011	-				-0.6
1,921,011	-				+0.0
1,921,011	-				+0.8
1,921,011	-				+1.8
1,921,011	-				-0.9
1,921,011	-				-2.0
1,921,011	-				+0.2
1,921,011	-				+1.2
1,921,108	+				-1.0
1,921,108	+				-0.5
1,921,108	+				+0.7
1,921,109	-				+1.0
1,921,309	+		AO356_08550	0.20	-0.4
1,921,309	+		AO356_08550	0.20	+0.0
1,921,310	-		AO356_08550	0.20	+0.2
1,921,310	-		AO356_08550	0.20	-0.2
1,921,397	-		AO356_08550	0.30	+0.5
1,921,397	-		AO356_08550	0.30	+0.0
1,921,458	+		AO356_08550	0.37	-0.0
1,921,458	+		AO356_08550	0.37	-0.1
1,921,458	+		AO356_08550	0.37	-0.2