Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06785

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
1,495,630	+		AO356_06775	0.78	+0.4
1,495,632	+		AO356_06775	0.79	-0.9
1,495,633	-		AO356_06775	0.80	-0.2
1,495,633	-		AO356_06775	0.80	+0.2
1,495,666	+				+1.1
1,495,666	+				+0.8
1,495,667	-				-0.4
1,495,718	+				+1.0
1,495,776	+				+0.1
1,495,957	+		AO356_06780	0.54	-0.1
1,495,992	+		AO356_06780	0.64	+0.6
1,495,993	-		AO356_06780	0.64	-0.1
1,496,012	+		AO356_06780	0.69	+0.7
1,496,012	+		AO356_06780	0.69	-2.0
1,496,012	+		AO356_06780	0.69	+0.8
1,496,088	+				-0.9
1,496,088	+				+0.5
1,496,089	-				-0.4
1,496,094	+				-0.7
1,496,094	+				-0.1
1,496,124	+				+0.3
1,496,125	-				+1.2
1,496,130	+				+1.6
1,496,130	+				+1.8
1,496,130	+				-0.1
1,496,130	+				+0.9
1,496,130	+				-0.1
1,496,131	-				+1.1
1,496,131	-				-0.3
1,496,131	-				+0.8
1,496,131	-				+0.1
1,496,131	-				+1.3
1,496,131	-				+0.5
1,496,131	-				-0.5
1,496,148	+				+0.8
1,496,148	+				-1.4
1,496,148	+				+0.4
1,496,165	+				+0.1
1,496,187	-				-1.1
1,496,211	+				+0.4
1,496,212	-				+0.3
1,496,301	+				+1.6
1,496,302	-				-0.8
1,496,302	-				+0.3
1,496,319	-				+1.1
1,496,357	-				-1.6
1,496,357	-				+1.0
1,496,357	-				+1.2
1,496,357	-				-0.7
1,496,399	-				-0.4
1,496,399	-				-0.6
1,496,478	+				+1.9
1,496,478	+				+0.5
1,496,478	+				+0.2
1,496,479	-				+0.6
1,496,479	-				+0.7
1,496,479	-				-0.7
1,496,614	+				-0.7
1,496,614	+				-0.1
1,496,615	-				-0.1
1,496,628	+				+0.1
1,496,628	+				-1.0
1,496,629	-				+1.0
1,496,629	-				+0.4
1,496,629	-				-0.8
1,496,648	+				+0.2
1,496,648	+				+1.3
1,496,648	+				+1.3
1,496,649	-				-0.3
1,496,649	-				-0.7
1,496,803	-		AO356_06785	0.17	-0.2
1,496,931	+		AO356_06785	0.29	-0.1
1,496,932	-		AO356_06785	0.29	-1.4
1,496,932	-		AO356_06785	0.29	-0.3
1,497,049	+		AO356_06785	0.39	-0.4
1,497,049	+		AO356_06785	0.39	-0.0
1,497,049	+		AO356_06785	0.39	+0.3
1,497,050	-		AO356_06785	0.40	+0.0
1,497,050	-		AO356_06785	0.40	+0.0
1,497,050	-		AO356_06785	0.40	-2.8
1,497,122	+		AO356_06785	0.46	+1.7
1,497,122	+		AO356_06785	0.46	+0.2
1,497,122	+		AO356_06785	0.46	-0.5
1,497,123	-		AO356_06785	0.46	+1.2
1,497,123	-		AO356_06785	0.46	+0.6
1,497,123	-		AO356_06785	0.46	-0.2
1,497,123	-		AO356_06785	0.46	+0.1
1,497,123	-		AO356_06785	0.46	-0.3
1,497,123	-		AO356_06785	0.46	+0.9
1,497,123	-		AO356_06785	0.46	-0.1
1,497,123	-		AO356_06785	0.46	-1.0
1,497,172	-		AO356_06785	0.51	+0.2
1,497,332	+		AO356_06785	0.65	-0.7
1,497,332	+		AO356_06785	0.65	-1.0
1,497,332	+		AO356_06785	0.65	+0.7
1,497,333	-		AO356_06785	0.66	+0.6
1,497,333	-		AO356_06785	0.66	-0.9
1,497,333	-		AO356_06785	0.66	+0.9
1,497,333	-		AO356_06785	0.66	-0.5
1,497,333	-		AO356_06785	0.66	+0.4
1,497,333	-		AO356_06785	0.66	-0.3
1,497,333	-		AO356_06785	0.66	-0.5
1,497,406	+		AO356_06785	0.72	+0.6
1,497,406	+		AO356_06785	0.72	+0.5
1,497,407	-		AO356_06785	0.72	+1.1
1,497,629	+				+0.8
1,497,629	+				+0.4
1,497,630	-				+1.0
1,497,630	-				+0.3
1,497,630	-				-0.1
1,497,630	-				-0.5
1,497,695	-				+0.4
1,497,748	+				+0.1
1,497,749	-				-0.6
1,497,772	+				-0.2
1,497,772	+				+0.3
1,497,772	+				-1.2
1,497,773	-				-0.4
1,497,787	+				-0.8
1,497,787	+				-0.4
1,497,788	-				-1.2
1,497,788	-				+1.2
1,497,788	-				-0.7
1,497,788	-				-0.2
1,497,889	+				+0.0
1,497,889	+				+0.7
1,497,889	+				+0.0
1,497,889	+				+0.1
1,497,890	-				+0.2
1,497,890	-				+0.5
1,497,890	-				-0.3
1,497,890	-				-0.6
1,497,890	-				-0.0
1,497,923	-				+0.3
1,497,940	+		AO356_06790	0.11	-0.2
1,497,955	+		AO356_06790	0.11	+0.3
1,497,970	+		AO356_06790	0.12	-0.4
1,497,971	-		AO356_06790	0.12	+0.3
1,498,027	+		AO356_06790	0.14	-0.2
1,498,028	-		AO356_06790	0.14	+0.7
1,498,255	+		AO356_06790	0.24	+0.4
1,498,255	+		AO356_06790	0.24	+0.6
1,498,255	+		AO356_06790	0.24	-0.2
1,498,255	+		AO356_06790	0.24	+0.1
1,498,255	+		AO356_06790	0.24	+0.8
1,498,255	+		AO356_06790	0.24	-0.8
1,498,255	+		AO356_06790	0.24	+0.1
1,498,256	-		AO356_06790	0.24	+0.2
1,498,256	-		AO356_06790	0.24	+1.3
1,498,256	-		AO356_06790	0.24	+0.7
1,498,270	+		AO356_06790	0.25	-0.6
1,498,271	-		AO356_06790	0.25	-0.5
1,498,292	-		AO356_06790	0.26	-1.2
1,498,429	+		AO356_06790	0.31	+0.7
1,498,450	+		AO356_06790	0.32	+0.2
1,498,450	+		AO356_06790	0.32	+0.4
1,498,451	-		AO356_06790	0.32	+2.9
1,498,451	-		AO356_06790	0.32	-1.2
1,498,516	-		AO356_06790	0.35	+1.6
1,498,534	+		AO356_06790	0.36	+0.5
1,498,534	+		AO356_06790	0.36	+0.6
1,498,534	+		AO356_06790	0.36	+0.2
1,498,534	+		AO356_06790	0.36	+0.1
1,498,534	+		AO356_06790	0.36	-0.4
1,498,535	-		AO356_06790	0.36	+0.9
1,498,535	-		AO356_06790	0.36	+0.6