Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06220

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
1,376,590	-		AO356_06215	0.11	-0.2
1,376,685	+		AO356_06215	0.21	-0.2
1,376,686	-		AO356_06215	0.21	+0.1
1,376,686	-		AO356_06215	0.21	-1.1
1,376,736	+		AO356_06215	0.27	+0.5
1,376,736	+		AO356_06215	0.27	+0.6
1,376,737	-		AO356_06215	0.27	-0.3
1,376,737	-		AO356_06215	0.27	+2.6
1,376,737	-		AO356_06215	0.27	-0.1
1,376,737	-		AO356_06215	0.27	+0.7
1,376,944	-		AO356_06215	0.50	+0.1
1,376,944	-		AO356_06215	0.50	+0.7
1,376,944	-		AO356_06215	0.50	-0.8
1,377,051	+		AO356_06215	0.62	-0.4
1,377,052	-		AO356_06215	0.62	+0.4
1,377,121	-		AO356_06215	0.69	-0.3
1,377,333	+				-1.1
1,377,431	+				+0.8
1,377,431	+				+0.3
1,377,432	-				+0.4
1,377,432	-				+0.2
1,377,469	+				-0.2
1,377,469	+				-2.2
1,377,469	+				+0.4
1,377,469	+				-0.1
1,377,469	+				+0.4
1,377,469	+				+0.0
1,377,470	-				+4.1
1,377,470	-				-2.2
1,377,505	-				+0.5
1,377,534	+				+0.0
1,377,538	+				-0.2
1,377,538	+				-1.0
1,377,538	+				+0.1
1,377,538	+				+0.5
1,377,538	+				+0.1
1,377,538	+				+0.7
1,377,538	+				+1.0
1,377,539	-				+0.4
1,377,539	-				-1.0
1,377,539	-				+1.4
1,377,539	-				+0.3
1,377,539	-				+2.4
1,377,555	-				+0.1
1,377,562	+				+0.6
1,377,562	+				-0.1
1,377,563	-				-0.9
1,377,661	+				-1.0
1,377,661	+				+2.1
1,377,662	-				+0.2
1,377,790	+		AO356_06220	0.19	-1.7
1,377,791	-		AO356_06220	0.19	-0.3
1,377,791	-		AO356_06220	0.19	+0.6
1,377,791	-		AO356_06220	0.19	+1.3
1,377,796	+		AO356_06220	0.20	-0.0
1,377,796	+		AO356_06220	0.20	-0.1
1,377,796	+		AO356_06220	0.20	-0.6
1,377,797	-		AO356_06220	0.20	-0.1
1,377,820	+		AO356_06220	0.21	-0.0
1,377,890	-		AO356_06220	0.27	-0.4
1,377,890	-		AO356_06220	0.27	+0.4
1,378,013	-		AO356_06220	0.37	+1.1
1,378,213	+		AO356_06220	0.52	-0.0
1,378,213	+		AO356_06220	0.52	+0.5
1,378,214	-		AO356_06220	0.52	+0.0
1,378,214	-		AO356_06220	0.52	-2.1
1,378,214	-		AO356_06220	0.52	+0.4
1,378,214	-		AO356_06220	0.52	-0.4
1,378,214	-		AO356_06220	0.52	+0.9
1,378,663	+		AO356_06220	0.87	+0.2
1,378,663	+		AO356_06220	0.87	+0.3
1,378,663	+		AO356_06220	0.87	+0.2
1,378,663	+		AO356_06220	0.87	-0.4
1,378,663	+		AO356_06220	0.87	+0.4
1,378,664	-		AO356_06220	0.87	-1.3
1,378,666	+		AO356_06220	0.88	-0.2
1,378,666	+		AO356_06220	0.88	+0.6
1,378,667	-		AO356_06220	0.88	+1.2
1,378,667	-		AO356_06220	0.88	+0.5
1,378,801	-				+1.0
1,378,854	+				+0.9
1,378,855	-				-0.5
1,378,861	+				+0.6
1,378,861	+				+0.0
1,378,861	+				-0.1
1,378,861	+				+0.4
1,378,862	-				+0.7
1,378,862	-				-0.1
1,378,862	-				+0.6
1,378,933	+		AO356_06225	0.13	-0.3
1,379,056	+		AO356_06225	0.35	+0.6
1,379,057	-		AO356_06225	0.35	+0.2
1,379,143	+		AO356_06225	0.51	+0.4
1,379,212	+		AO356_06225	0.63	-0.8
1,379,212	+		AO356_06225	0.63	-0.7
1,379,212	+		AO356_06225	0.63	-1.4
1,379,213	-		AO356_06225	0.64	-1.5
1,379,213	-		AO356_06225	0.64	-1.3
1,379,213	-		AO356_06225	0.64	-0.8
1,379,227	+		AO356_06225	0.66	+0.2
1,379,392	-				+0.4
1,379,567	+				-0.1
1,379,594	+				-0.7
1,379,594	+				-0.7
1,379,594	+				+0.3
1,379,595	-				+0.7
1,379,595	-				-0.0
1,379,595	-				-1.1
1,379,616	+				-0.1
1,379,616	+				-1.0
1,379,616	+				-1.2
1,379,616	+				+0.4
1,379,616	+				+0.6
1,379,616	+				-1.0
1,379,616	+				+0.4
1,379,616	+				-0.5
1,379,616	+				+0.3
1,379,616	+				+0.0
1,379,616	+				-0.2
1,379,616	+				+0.7
1,379,617	-				+0.5
1,379,617	-				+0.1
1,379,617	-				-0.1
1,379,617	-				+0.3
1,379,617	-				-1.1
1,379,617	-				+0.4
1,379,617	-				+0.0
1,379,660	+		AO356_06230	0.13	+0.5
1,379,661	-		AO356_06230	0.13	-0.5
1,379,722	+		AO356_06230	0.22	+0.1
1,379,722	+		AO356_06230	0.22	+0.3
1,379,722	+		AO356_06230	0.22	+0.3
1,379,723	-		AO356_06230	0.22	-2.7
1,379,725	+		AO356_06230	0.22	-0.3
1,379,725	+		AO356_06230	0.22	+0.6
1,379,725	+		AO356_06230	0.22	-0.3
1,379,725	+		AO356_06230	0.22	-0.6
1,379,725	+		AO356_06230	0.22	-0.6
1,379,726	-		AO356_06230	0.22	-0.0