Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05660

Experiment: Ceftazidime 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.2 mg/ml
1,264,589	-		AO356_05650	0.28	-0.5
1,264,589	-		AO356_05650	0.28	+0.2
1,264,589	-		AO356_05650	0.28	-3.7
1,264,598	-		AO356_05650	0.30	+0.4
1,264,637	+		AO356_05650	0.40	+0.6
1,264,637	+		AO356_05650	0.40	+0.0
1,264,637	+		AO356_05650	0.40	+0.2
1,264,637	+		AO356_05650	0.40	-0.2
1,264,637	+		AO356_05650	0.40	-1.2
1,264,638	-		AO356_05650	0.40	-0.3
1,264,638	-		AO356_05650	0.40	-0.3
1,264,638	-		AO356_05650	0.40	-0.7
1,264,638	-		AO356_05650	0.40	-1.4
1,264,640	-		AO356_05650	0.40	+0.6
1,264,725	-		AO356_05650	0.61	-0.2
1,264,799	+		AO356_05650	0.78	-0.5
1,264,817	-		AO356_05650	0.82	-1.6
1,264,889	+				-0.6
1,264,889	+				+0.4
1,264,889	+				+0.4
1,264,889	+				+0.4
1,264,889	+				-1.0
1,264,889	+				+0.0
1,264,889	+				+0.4
1,264,889	+				+0.2
1,264,890	-				+0.7
1,264,890	-				-0.1
1,264,890	-				+0.9
1,265,049	+		AO356_05655	0.81	-1.2
1,265,049	+		AO356_05655	0.81	+0.5
1,265,049	+		AO356_05655	0.81	-0.7
1,265,049	+		AO356_05655	0.81	-0.2
1,265,050	-		AO356_05655	0.81	-0.3
1,265,050	-		AO356_05655	0.81	-0.3
1,265,126	+				-1.4
1,265,126	+				-0.3
1,265,126	+				-0.4
1,265,126	+				+1.0
1,265,126	+				-0.8
1,265,126	+				+1.1
1,265,126	+				-0.0
1,265,127	-				+0.0
1,265,127	-				+1.1
1,265,127	-				-1.7
1,265,127	-				-0.2
1,265,127	-				+0.7
1,265,127	-				+0.2
1,265,168	-				-0.6
1,265,168	-				-0.5
1,265,168	-				+0.3
1,265,168	-				+0.3
1,265,222	-				-0.5
1,265,235	+				-0.2
1,265,235	+				-0.7
1,265,235	+				-0.1
1,265,294	+				-0.7
1,265,294	+				-0.4
1,265,295	-				-0.2
1,265,306	+				+0.1
1,265,306	+				-0.3
1,265,306	+				+0.6
1,265,307	-				+0.0
1,265,307	-				+0.9
1,265,307	-				+0.0
1,265,316	-				-0.3
1,265,525	-				-0.4
1,265,525	-				-0.7
1,265,547	+				+0.8
1,265,547	+				-1.2
1,265,548	-				+0.8
1,265,548	-				-0.2
1,265,548	-				-0.9
1,265,548	-				-1.1
1,265,548	-				+0.8
1,265,548	-				+0.2
1,265,548	-				+0.5
1,265,548	-				-0.9
1,265,549	+				-1.6
1,265,549	+				-0.7
1,265,661	+		AO356_05660	0.11	+0.0
1,265,661	+		AO356_05660	0.11	+0.1
1,265,829	-		AO356_05660	0.26	-0.1
1,265,957	+		AO356_05660	0.37	-0.8
1,265,957	+		AO356_05660	0.37	+0.0
1,265,957	+		AO356_05660	0.37	-0.5
1,265,958	-		AO356_05660	0.37	-0.1
1,265,972	+		AO356_05660	0.39	+0.8
1,265,973	-		AO356_05660	0.39	+0.5
1,266,173	-		AO356_05660	0.56	-0.3
1,266,231	-		AO356_05660	0.62	-1.7
1,266,258	+		AO356_05660	0.64	+0.5
1,266,258	+		AO356_05660	0.64	-0.5
1,266,258	+		AO356_05660	0.64	+0.6
1,266,258	+		AO356_05660	0.64	-0.7
1,266,259	-		AO356_05660	0.64	-0.5
1,266,259	-		AO356_05660	0.64	+1.1
1,266,297	+		AO356_05660	0.68	+0.2
1,266,297	+		AO356_05660	0.68	-0.5
1,266,298	-		AO356_05660	0.68	+0.5
1,266,298	-		AO356_05660	0.68	-0.1
1,266,298	-		AO356_05660	0.68	-0.8
1,266,298	-		AO356_05660	0.68	+0.6
1,266,336	+		AO356_05660	0.71	+1.5
1,266,400	+		AO356_05660	0.77	+1.0
1,266,401	-		AO356_05660	0.77	+0.2
1,266,401	-		AO356_05660	0.77	+0.5
1,266,401	-		AO356_05660	0.77	+0.9
1,266,430	+		AO356_05660	0.79	+0.3
1,266,430	+		AO356_05660	0.79	+1.3
1,266,431	-		AO356_05660	0.80	+0.4
1,266,477	+		AO356_05660	0.84	+0.1
1,266,477	+		AO356_05660	0.84	-0.6
1,266,477	+		AO356_05660	0.84	-0.5
1,266,478	-		AO356_05660	0.84	+0.0
1,266,478	-		AO356_05660	0.84	+1.1
1,266,478	-		AO356_05660	0.84	+1.1
1,266,478	-		AO356_05660	0.84	+0.2
1,266,478	-		AO356_05660	0.84	-0.4
1,266,533	+		AO356_05660	0.89	-1.7
1,266,533	+		AO356_05660	0.89	+0.9
1,266,579	+				-0.5
1,266,579	+				+1.2
1,266,579	+				+1.2
1,266,579	+				-0.9
1,266,580	-				-0.1
1,266,666	-				+0.1
1,266,689	+				+1.1
1,266,704	-				-0.9
1,266,707	+				-0.1
1,266,708	-				+0.6
1,266,708	-				-1.4
1,266,708	-				+0.5
1,267,080	+		AO356_05665	0.80	+0.5
1,267,360	+		AO356_05670	0.17	-0.8
1,267,361	-		AO356_05670	0.17	-1.2
1,267,366	+		AO356_05670	0.17	-0.1
1,267,367	-		AO356_05670	0.18	-0.5
1,267,432	+		AO356_05670	0.24	-0.5
1,267,432	+		AO356_05670	0.24	+0.7
1,267,432	+		AO356_05670	0.24	-0.3
1,267,433	-		AO356_05670	0.24	+0.6