Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003342

Experiment: Plant outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant outgrowth control
3,764,810	+		ABIE53_003341	0.62	-0.1
3,764,810	+		ABIE53_003341	0.62	-1.2
3,764,811	-		ABIE53_003341	0.62	-0.7
3,764,846	+		ABIE53_003341	0.64	-0.5
3,764,847	-		ABIE53_003341	0.64	+1.1
3,764,848	+		ABIE53_003341	0.64	+0.7
3,764,848	+		ABIE53_003341	0.64	-0.7
3,764,849	-		ABIE53_003341	0.64	-1.4
3,764,849	-		ABIE53_003341	0.64	+0.1
3,764,962	+		ABIE53_003341	0.70	-0.0
3,764,962	+		ABIE53_003341	0.70	-0.5
3,765,002	+		ABIE53_003341	0.72	-2.1
3,765,002	+		ABIE53_003341	0.72	-2.5
3,765,002	+		ABIE53_003341	0.72	-1.1
3,765,003	-		ABIE53_003341	0.73	-0.5
3,765,003	-		ABIE53_003341	0.73	-1.6
3,765,003	-		ABIE53_003341	0.73	+0.7
3,765,003	-		ABIE53_003341	0.73	-0.9
3,765,003	-		ABIE53_003341	0.73	-2.4
3,765,008	+		ABIE53_003341	0.73	-1.8
3,765,008	+		ABIE53_003341	0.73	-0.7
3,765,008	+		ABIE53_003341	0.73	-0.1
3,765,009	-		ABIE53_003341	0.73	+0.1
3,765,009	-		ABIE53_003341	0.73	+0.4
3,765,009	-		ABIE53_003341	0.73	+0.1
3,765,015	+		ABIE53_003341	0.73	+0.5
3,765,015	+		ABIE53_003341	0.73	-0.6
3,765,015	+		ABIE53_003341	0.73	-1.9
3,765,016	-		ABIE53_003341	0.73	+2.4
3,765,016	-		ABIE53_003341	0.73	-1.0
3,765,016	-		ABIE53_003341	0.73	-2.1
3,765,016	-		ABIE53_003341	0.73	-0.5
3,765,016	-		ABIE53_003341	0.73	+0.6
3,765,016	-		ABIE53_003341	0.73	+0.8
3,765,016	-		ABIE53_003341	0.73	+0.5
3,765,035	+		ABIE53_003341	0.74	-0.1
3,765,036	-		ABIE53_003341	0.74	-2.5
3,765,036	-		ABIE53_003341	0.74	-1.2
3,765,041	-		ABIE53_003341	0.75	+1.5
3,765,041	-		ABIE53_003341	0.75	+1.1
3,765,235	+		ABIE53_003341	0.86	+1.1
3,765,342	+				-0.7
3,765,343	-				-2.1
3,765,343	-				+1.6
3,765,343	-				+0.1
3,765,343	-				-1.3
3,765,343	-				-0.5
3,765,477	+				-0.5
3,765,477	+				-1.5
3,765,477	+				+0.1
3,765,477	+				-0.1
3,765,477	+				+2.1
3,765,477	+				-0.8
3,765,477	+				+2.1
3,765,477	+				-0.5
3,765,477	+				-0.5
3,765,477	+				-0.7
3,765,478	-				-1.9
3,765,478	-				+0.6
3,765,478	-				-0.5
3,765,478	-				-0.8
3,765,478	-				+0.1
3,765,478	-				+1.1
3,765,478	-				-0.5
3,765,478	-				+0.8
3,765,478	-				-0.9
3,765,478	-				-0.3
3,765,478	-				+1.5
3,765,631	+				-0.7
3,765,631	+				-1.2
3,765,631	+				+0.2
3,765,631	+				-2.3
3,765,631	+				-1.6
3,765,632	-				+0.1
3,765,637	+				-0.2
3,765,637	+				-0.9
3,765,637	+				+0.2
3,765,637	+				+0.1
3,765,637	+				-0.1
3,765,638	-				-0.7
3,765,782	+				-0.9
3,765,782	+				+2.7
3,765,782	+				+0.4
3,765,782	+				+1.1
3,765,782	+				-0.3
3,765,782	+				-2.8
3,765,783	-				+0.1
3,765,783	-				-1.1
3,765,783	-				-0.5
3,765,783	-				+0.5
3,765,783	-				-1.1
3,765,783	-				+2.7
3,765,783	-				-1.1
3,765,785	+				-2.1
3,765,785	+				-0.2
3,765,786	-				+0.1
3,765,791	+				-1.2
3,765,791	+				+1.1
3,765,801	-				-0.8
3,765,801	-				+0.7
3,765,801	-				-0.5
3,765,822	-				-0.4
3,765,822	-				+1.7
3,765,822	-				-2.2
3,765,824	+				-1.6
3,765,824	+				-0.9
3,765,825	-				-2.4
3,765,825	-				+1.1
3,765,845	+		ABIE53_003342	0.12	+0.7
3,765,845	+		ABIE53_003342	0.12	+0.5
3,765,845	+		ABIE53_003342	0.12	+0.1
3,765,846	-		ABIE53_003342	0.12	-0.9
3,765,846	-		ABIE53_003342	0.12	-0.1
3,765,863	+		ABIE53_003342	0.15	-2.2
3,765,863	+		ABIE53_003342	0.15	-2.0
3,765,863	+		ABIE53_003342	0.15	+2.7
3,765,864	-		ABIE53_003342	0.15	-0.1
3,765,864	-		ABIE53_003342	0.15	+0.1
3,765,864	-		ABIE53_003342	0.15	+0.7
3,765,864	-		ABIE53_003342	0.15	+2.1
3,765,864	-		ABIE53_003342	0.15	-0.9
3,765,938	+		ABIE53_003342	0.28	-0.9
3,765,938	+		ABIE53_003342	0.28	+0.2
3,765,938	+		ABIE53_003342	0.28	+1.7
3,765,939	-		ABIE53_003342	0.28	-1.2
3,765,950	+		ABIE53_003342	0.30	-1.9
3,765,977	+		ABIE53_003342	0.35	-0.7
3,765,977	+		ABIE53_003342	0.35	-1.0
3,765,978	-		ABIE53_003342	0.35	-1.0
3,765,978	-		ABIE53_003342	0.35	-0.6
3,765,978	-		ABIE53_003342	0.35	+2.4
3,766,181	+		ABIE53_003342	0.70	-0.8
3,766,181	+		ABIE53_003342	0.70	-1.7
3,766,182	-		ABIE53_003342	0.70	+0.1
3,766,182	-		ABIE53_003342	0.70	-0.5
3,766,196	+		ABIE53_003342	0.73	-0.9
3,766,196	+		ABIE53_003342	0.73	-2.7
3,766,196	+		ABIE53_003342	0.73	-0.9
3,766,196	+		ABIE53_003342	0.73	-0.5
3,766,197	-		ABIE53_003342	0.73	-2.4
3,766,197	-		ABIE53_003342	0.73	+1.1
3,766,197	-		ABIE53_003342	0.73	-2.4
3,766,197	-		ABIE53_003342	0.73	+0.1
3,766,291	+		ABIE53_003342	0.89	-1.2
3,766,292	-		ABIE53_003342	0.89	+3.4
3,766,292	-		ABIE53_003342	0.89	+0.5
3,766,339	+				+2.7
3,766,339	+				-1.4
3,766,339	+				-0.2
3,766,339	+				+0.7
3,766,339	+				-0.9
3,766,340	-				-1.2
3,766,340	-				-0.5
3,766,365	+				+2.7
3,766,367	-				+0.6
3,766,389	+				+0.1
3,766,389	+				-0.1
3,766,389	+				-1.5
3,766,430	+				-0.3
3,766,430	+				-0.6
3,766,430	+				-0.5
3,766,430	+				-2.5
3,766,431	-				-1.8
3,766,431	-				-1.4
3,766,431	-				-1.6
3,766,431	-				+1.1
3,766,431	-				+0.4
3,766,437	+				-0.8
3,766,437	+				-0.9
3,766,437	+				-1.2
3,766,438	-				+1.1
3,766,438	-				-0.4
3,766,438	-				+2.9
3,766,438	-				-1.1
3,766,438	-				-0.1
3,766,499	-				-0.5
3,766,599	+				+1.1
3,766,599	+				+2.1
3,766,599	+				+0.1
3,766,600	-				+1.8
3,766,600	-				+1.0
3,767,265	-				+0.8
3,767,265	-				-0.2
3,767,265	-				-0.2
3,767,265	-				-0.9
3,767,265	-				+1.1
3,767,265	-				+0.0
3,767,297	-				+0.5
3,767,297	-				-1.9
3,767,311	+				-2.2
3,767,311	+				-2.1
3,767,312	-				-2.2
3,767,348	+				-1.6
3,767,348	+				-2.5
3,767,348	+				-1.5
3,767,348	+				-1.6
3,767,348	+				-1.8
3,767,349	-				+0.1
3,767,349	-				+0.1