Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2773 and Dshi_2774 overlap by 4 nucleotides Dshi_2774 and Dshi_2775 are separated by 58 nucleotides Dshi_2775 and Dshi_2776 are separated by 352 nucleotides
Dshi_2773: Dshi_2773 - amidohydrolase (RefSeq), at 2,935,167 to 2,936,507
_2773
Dshi_2774: Dshi_2774 - histidinol-phosphate phosphatase, putative (RefSeq), at 2,936,504 to 2,937,325
_2774
Dshi_2775: Dshi_2775 - transcriptional regulator, XRE family (RefSeq), at 2,937,384 to 2,937,755
_2775
Dshi_2776: Dshi_2776 - Alcohol dehydrogenase zinc-binding domain protein (RefSeq), at 2,938,108 to 2,939,067
_2776
Position (kb)
2936
2937
2938 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2935.648 kb on - strand, within Dshi_2773 at 2935.737 kb on + strand, within Dshi_2773 at 2935.740 kb on - strand, within Dshi_2773 at 2935.740 kb on - strand, within Dshi_2773 at 2935.745 kb on - strand, within Dshi_2773 at 2935.856 kb on - strand, within Dshi_2773 at 2935.882 kb on - strand, within Dshi_2773 at 2935.889 kb on + strand, within Dshi_2773 at 2935.910 kb on + strand, within Dshi_2773 at 2935.917 kb on - strand, within Dshi_2773 at 2935.917 kb on - strand, within Dshi_2773 at 2936.123 kb on + strand, within Dshi_2773 at 2936.220 kb on - strand, within Dshi_2773 at 2936.238 kb on - strand, within Dshi_2773 at 2936.251 kb on - strand, within Dshi_2773 at 2936.295 kb on - strand, within Dshi_2773 at 2936.320 kb on + strand, within Dshi_2773 at 2936.328 kb on - strand, within Dshi_2773 at 2936.387 kb on + strand at 2936.390 kb on - strand at 2936.477 kb on - strand at 2937.328 kb on + strand at 2937.381 kb on + strand at 2937.538 kb on - strand, within Dshi_2775 at 2937.572 kb on + strand, within Dshi_2775 at 2937.572 kb on + strand, within Dshi_2775 at 2937.582 kb on - strand, within Dshi_2775 at 2937.628 kb on + strand, within Dshi_2775 at 2937.688 kb on + strand, within Dshi_2775 at 2937.731 kb on - strand at 2937.807 kb on + strand at 2937.898 kb on - strand at 2938.079 kb on - strand at 2938.148 kb on + strand at 2938.186 kb on + strand at 2938.191 kb on - strand at 2938.247 kb on - strand, within Dshi_2776 at 2938.254 kb on - strand, within Dshi_2776 at 2938.280 kb on + strand, within Dshi_2776 at 2938.312 kb on - strand, within Dshi_2776
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,935,648 - Dshi_2773 0.36 +1.2 2,935,737 + Dshi_2773 0.43 -0.1 2,935,740 - Dshi_2773 0.43 +0.3 2,935,740 - Dshi_2773 0.43 -1.0 2,935,745 - Dshi_2773 0.43 -0.5 2,935,856 - Dshi_2773 0.51 -0.3 2,935,882 - Dshi_2773 0.53 -0.7 2,935,889 + Dshi_2773 0.54 -0.0 2,935,910 + Dshi_2773 0.55 -0.3 2,935,917 - Dshi_2773 0.56 +1.0 2,935,917 - Dshi_2773 0.56 -0.1 2,936,123 + Dshi_2773 0.71 +1.1 2,936,220 - Dshi_2773 0.79 -0.2 2,936,238 - Dshi_2773 0.80 +0.1 2,936,251 - Dshi_2773 0.81 -0.6 2,936,295 - Dshi_2773 0.84 +0.3 2,936,320 + Dshi_2773 0.86 +0.4 2,936,328 - Dshi_2773 0.87 -0.6 2,936,387 + +0.9 2,936,390 - -0.5 2,936,477 - -0.2 2,937,328 + -0.4 2,937,381 + -0.6 2,937,538 - Dshi_2775 0.41 -0.1 2,937,572 + Dshi_2775 0.51 -1.1 2,937,572 + Dshi_2775 0.51 -0.7 2,937,582 - Dshi_2775 0.53 -2.8 2,937,628 + Dshi_2775 0.66 -0.3 2,937,688 + Dshi_2775 0.82 -0.4 2,937,731 - +0.2 2,937,807 + -0.0 2,937,898 - -0.1 2,938,079 - -0.3 2,938,148 + +1.5 2,938,186 + +0.5 2,938,191 - +0.1 2,938,247 - Dshi_2776 0.14 -1.1 2,938,254 - Dshi_2776 0.15 +0.0 2,938,280 + Dshi_2776 0.18 -0.2 2,938,312 - Dshi_2776 0.21 -0.4
Or see this region's nucleotide sequence