Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1930

Experiment: L-Proline (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (N)
2,037,576	-		Ga0059261_1929	0.19	+2.2
2,037,576	-		Ga0059261_1929	0.19	+3.1
2,037,779	+		Ga0059261_1929	0.44	+4.4
2,037,779	+		Ga0059261_1929	0.44	+1.1
2,037,780	-		Ga0059261_1929	0.44	+2.9
2,037,780	-		Ga0059261_1929	0.44	+2.6
2,037,780	-		Ga0059261_1929	0.44	+3.3
2,037,780	-		Ga0059261_1929	0.44	+1.7
2,037,780	-		Ga0059261_1929	0.44	+2.3
2,037,780	-		Ga0059261_1929	0.44	+2.0
2,037,780	-				+3.8
2,037,839	+		Ga0059261_1929	0.51	+2.9
2,037,839	+		Ga0059261_1929	0.51	+3.0
2,037,839	+		Ga0059261_1929	0.51	+1.7
2,037,840	-		Ga0059261_1929	0.51	+2.5
2,037,840	-		Ga0059261_1929	0.51	+2.5
2,037,950	+		Ga0059261_1929	0.65	+1.2
2,037,950	+		Ga0059261_1929	0.65	+2.4
2,037,953	+		Ga0059261_1929	0.65	+2.1
2,037,953	+		Ga0059261_1929	0.65	+1.6
2,037,953	+		Ga0059261_1929	0.65	+2.6
2,037,954	-		Ga0059261_1929	0.65	+2.2
2,037,954	-		Ga0059261_1929	0.65	+2.3
2,038,092	+		Ga0059261_1929	0.82	+2.5
2,038,166	+				+2.8
2,038,166	+				+2.7
2,038,235	+				+0.5
2,038,257	+				+0.8
2,038,257	+				-1.3
2,038,257	+				-0.2
2,038,258	-				-1.7
2,038,273	+				+0.5
2,038,273	+				+0.8
2,038,273	+				-0.5
2,038,273	+				-0.1
2,038,274	-				+1.3
2,038,387	+				-0.1
2,038,652	+		Ga0059261_1930	0.21	-0.7
2,038,652	+		Ga0059261_1930	0.21	+2.4
2,038,652	+		Ga0059261_1930	0.21	+0.6
2,038,652	+		Ga0059261_1930	0.21	-0.5
2,038,652	+		Ga0059261_1930	0.21	-0.6
2,038,653	-		Ga0059261_1930	0.21	+0.0
2,038,653	-		Ga0059261_1930	0.21	+0.1
2,038,736	+		Ga0059261_1930	0.26	-0.8
2,038,736	+		Ga0059261_1930	0.26	-0.0
2,038,736	+		Ga0059261_1930	0.26	+0.2
2,038,737	-		Ga0059261_1930	0.26	-0.6
2,038,737	-		Ga0059261_1930	0.26	+0.5
2,038,737	-		Ga0059261_1930	0.26	+3.0
2,038,737	-		Ga0059261_1930	0.26	-1.0
2,038,779	-		Ga0059261_1930	0.28	+0.7
2,038,808	+		Ga0059261_1930	0.30	-0.3
2,038,808	+		Ga0059261_1930	0.30	-0.0
2,038,808	+		Ga0059261_1930	0.30	+0.7
2,038,808	+		Ga0059261_1930	0.30	+0.7
2,038,808	+		Ga0059261_1930	0.30	-1.2
2,038,809	-		Ga0059261_1930	0.30	+0.0
2,038,809	-		Ga0059261_1930	0.30	+0.2
2,038,809	-		Ga0059261_1930	0.30	+0.2
2,038,809	-		Ga0059261_1930	0.30	-0.9
2,038,809	-		Ga0059261_1930	0.30	-0.5
2,038,810	+		Ga0059261_1930	0.30	+0.3
2,038,810	+		Ga0059261_1930	0.30	-0.2
2,038,925	-		Ga0059261_1930	0.37	+0.1
2,038,925	-		Ga0059261_1930	0.37	-0.0
2,038,952	+		Ga0059261_1930	0.39	+0.1
2,038,952	+		Ga0059261_1930	0.39	-0.3
2,038,952	+		Ga0059261_1930	0.39	-0.1
2,039,012	+		Ga0059261_1930	0.42	-1.1
2,039,012	+		Ga0059261_1930	0.42	+0.5
2,039,013	-		Ga0059261_1930	0.42	+0.2
2,039,013	-		Ga0059261_1930	0.42	+0.2
2,039,013	-		Ga0059261_1930	0.42	-0.2
2,039,013	-		Ga0059261_1930	0.42	-0.2
2,039,177	+		Ga0059261_1930	0.52	-0.1
2,039,178	-		Ga0059261_1930	0.52	+1.0
2,039,178	-				-0.1
2,039,178	-		Ga0059261_1930	0.52	+1.3
2,039,178	-		Ga0059261_1930	0.52	-0.3
2,039,178	-		Ga0059261_1930	0.52	+0.6
2,039,203	+		Ga0059261_1930	0.54	-2.0
2,039,203	+				+0.5
2,039,204	-		Ga0059261_1930	0.54	-0.3
2,039,242	+		Ga0059261_1930	0.56	-0.9
2,039,252	+		Ga0059261_1930	0.57	+1.7
2,039,252	+		Ga0059261_1930	0.57	-0.4
2,039,252	+		Ga0059261_1930	0.57	-0.3
2,039,253	-				+0.5
2,039,300	+		Ga0059261_1930	0.59	-0.9
2,039,472	-		Ga0059261_1930	0.70	-0.1
2,039,472	-		Ga0059261_1930	0.70	-0.4
2,039,472	-		Ga0059261_1930	0.70	-0.6
2,039,537	+		Ga0059261_1930	0.74	-0.0
2,039,538	-		Ga0059261_1930	0.74	-1.2
2,039,538	-		Ga0059261_1930	0.74	+1.0
2,039,538	-		Ga0059261_1930	0.74	+1.5
2,039,538	-		Ga0059261_1930	0.74	+0.0
2,039,538	-		Ga0059261_1930	0.74	-0.2
2,039,615	+		Ga0059261_1930	0.78	+1.0
2,039,615	+		Ga0059261_1930	0.78	-0.5
2,039,615	+		Ga0059261_1930	0.78	+0.3
2,039,615	+		Ga0059261_1930	0.78	+0.8
2,039,616	-		Ga0059261_1930	0.78	-2.7
2,039,616	-		Ga0059261_1930	0.78	-0.7
2,039,616	-		Ga0059261_1930	0.78	-0.5
2,039,616	-		Ga0059261_1930	0.78	+0.2
2,040,171	+		Ga0059261_1931	0.27	-0.1
2,040,171	+		Ga0059261_1931	0.27	+0.9
2,040,171	+				+1.5
2,040,171	+		Ga0059261_1931	0.27	+0.3
2,040,171	+		Ga0059261_1931	0.27	-0.3
2,040,171	+		Ga0059261_1931	0.27	+0.1
2,040,172	-		Ga0059261_1931	0.28	-0.5
2,040,172	-		Ga0059261_1931	0.28	+0.3
2,040,172	-		Ga0059261_1931	0.28	+0.4
2,040,172	-		Ga0059261_1931	0.28	-0.7
2,040,172	-		Ga0059261_1931	0.28	-1.3
2,040,172	-		Ga0059261_1931	0.28	+1.5
2,040,172	-		Ga0059261_1931	0.28	-0.1
2,040,172	-		Ga0059261_1931	0.28	+0.2
2,040,172	-		Ga0059261_1931	0.28	-0.3
2,040,186	+		Ga0059261_1931	0.30	+0.1
2,040,186	+		Ga0059261_1931	0.30	+0.9
2,040,186	+		Ga0059261_1931	0.30	+0.3
2,040,186	+		Ga0059261_1931	0.30	+0.7
2,040,186	+		Ga0059261_1931	0.30	-0.4
2,040,186	+		Ga0059261_1931	0.30	-0.2
2,040,186	+		Ga0059261_1931	0.30	-1.0
2,040,186	+		Ga0059261_1931	0.30	-0.8
2,040,187	-		Ga0059261_1931	0.30	+0.1
2,040,187	-		Ga0059261_1931	0.30	+0.5
2,040,187	-		Ga0059261_1931	0.30	-0.2
2,040,187	-		Ga0059261_1931	0.30	-0.5
2,040,187	-		Ga0059261_1931	0.30	-0.3
2,040,187	-		Ga0059261_1931	0.30	+1.0
2,040,187	-		Ga0059261_1931	0.30	-0.1
2,040,256	-		Ga0059261_1931	0.40	+0.9
2,040,285	+		Ga0059261_1931	0.44	+0.5
2,040,285	+		Ga0059261_1931	0.44	+0.6
2,040,285	+		Ga0059261_1931	0.44	-0.4
2,040,286	-		Ga0059261_1931	0.44	-0.1
2,040,286	-		Ga0059261_1931	0.44	-0.2
2,040,656	+				+0.2
2,040,656	+				+0.2
2,040,657	-				-0.3
2,040,657	-				+0.1
2,040,657	-				-1.4
2,040,657	-				+1.3
2,040,657	-				-0.3
2,040,657	-				+2.5
2,040,660	-				-1.0
2,040,839	-		Ga0059261_1932	0.11	-1.0
2,040,847	+		Ga0059261_1932	0.12	+0.7
2,040,847	+		Ga0059261_1932	0.12	+1.5
2,040,847	+		Ga0059261_1932	0.12	+0.5
2,040,847	+		Ga0059261_1932	0.12	+0.7
2,040,848	-				+2.0
2,040,848	-		Ga0059261_1932	0.12	+1.4
2,040,848	-		Ga0059261_1932	0.12	+0.1
2,040,889	+		Ga0059261_1932	0.15	+0.1
2,040,889	+		Ga0059261_1932	0.15	-0.7
2,040,889	+		Ga0059261_1932	0.15	-0.1
2,040,890	-		Ga0059261_1932	0.15	-0.5
2,040,890	-		Ga0059261_1932	0.15	-1.0
2,040,890	-		Ga0059261_1932	0.15	+0.2
2,040,947	+		Ga0059261_1932	0.18	+0.6
2,040,947	+		Ga0059261_1932	0.18	+0.5
2,040,947	+		Ga0059261_1932	0.18	-0.3
2,040,947	+		Ga0059261_1932	0.18	+0.0
2,040,947	+		Ga0059261_1932	0.18	-0.5
2,040,948	-		Ga0059261_1932	0.18	-2.3
2,040,948	-		Ga0059261_1932	0.18	+0.2
2,040,948	-		Ga0059261_1932	0.18	+0.1
2,040,948	-		Ga0059261_1932	0.18	+0.3
2,040,948	-		Ga0059261_1932	0.18	-0.2
2,040,948	-		Ga0059261_1932	0.18	+0.2
2,040,948	-		Ga0059261_1932	0.18	-0.6
2,040,948	-		Ga0059261_1932	0.18	-0.7
2,040,948	-		Ga0059261_1932	0.18	-1.5
2,040,948	-		Ga0059261_1932	0.18	+0.3
2,040,955	+		Ga0059261_1932	0.19	-0.2