Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0142 and Dshi_0143 are separated by 314 nucleotides Dshi_0143 and Dshi_0144 are separated by 34 nucleotides Dshi_0144 and Dshi_0145 are separated by 160 nucleotides
Dshi_0142: Dshi_0142 - penicillin-binding protein, 1A family (RefSeq), at 140,693 to 142,882
_0142
Dshi_0143: Dshi_0143 - nitrogen regulatory protein P-II (RefSeq), at 143,197 to 143,535
_0143
Dshi_0144: Dshi_0144 - ammonium transporter (RefSeq), at 143,570 to 144,883
_0144
Dshi_0145: Dshi_0145 - Aspartate transaminase (RefSeq), at 145,044 to 146,222
_0145
Position (kb)
143
144
145 Strain fitness (log2 ratio)
-1
0
1 at 142.841 kb on - strand at 142.917 kb on + strand at 142.942 kb on - strand at 142.950 kb on - strand at 142.979 kb on - strand at 143.005 kb on - strand at 143.187 kb on + strand at 143.300 kb on - strand, within Dshi_0143 at 143.743 kb on + strand, within Dshi_0144 at 143.830 kb on - strand, within Dshi_0144 at 143.921 kb on - strand, within Dshi_0144 at 143.939 kb on + strand, within Dshi_0144 at 144.199 kb on - strand, within Dshi_0144 at 144.224 kb on - strand, within Dshi_0144 at 144.240 kb on - strand, within Dshi_0144 at 144.264 kb on + strand, within Dshi_0144 at 144.304 kb on - strand, within Dshi_0144 at 144.456 kb on - strand, within Dshi_0144 at 144.472 kb on - strand, within Dshi_0144 at 144.513 kb on + strand, within Dshi_0144 at 144.570 kb on + strand, within Dshi_0144 at 144.630 kb on + strand, within Dshi_0144 at 144.677 kb on - strand, within Dshi_0144 at 144.711 kb on - strand, within Dshi_0144 at 144.761 kb on - strand at 144.761 kb on - strand at 144.869 kb on - strand at 144.885 kb on - strand at 144.949 kb on - strand at 144.949 kb on - strand at 144.956 kb on + strand at 144.964 kb on + strand at 144.988 kb on - strand at 145.037 kb on + strand at 145.258 kb on + strand, within Dshi_0145 at 145.260 kb on - strand, within Dshi_0145 at 145.316 kb on + strand, within Dshi_0145 at 145.364 kb on + strand at 145.412 kb on - strand, within Dshi_0145 at 145.522 kb on + strand, within Dshi_0145 at 145.726 kb on + strand, within Dshi_0145
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 142,841 - -0.6 142,917 + +0.3 142,942 - +0.7 142,950 - -1.4 142,979 - -0.2 143,005 - +0.5 143,187 + +0.0 143,300 - Dshi_0143 0.30 +0.6 143,743 + Dshi_0144 0.13 -0.8 143,830 - Dshi_0144 0.20 -0.9 143,921 - Dshi_0144 0.27 -1.3 143,939 + Dshi_0144 0.28 -0.1 144,199 - Dshi_0144 0.48 +0.6 144,224 - Dshi_0144 0.50 +0.6 144,240 - Dshi_0144 0.51 -0.0 144,264 + Dshi_0144 0.53 +0.5 144,304 - Dshi_0144 0.56 +0.6 144,456 - Dshi_0144 0.67 -0.8 144,472 - Dshi_0144 0.69 +0.6 144,513 + Dshi_0144 0.72 -1.1 144,570 + Dshi_0144 0.76 -0.5 144,630 + Dshi_0144 0.81 -1.0 144,677 - Dshi_0144 0.84 -1.2 144,711 - Dshi_0144 0.87 -0.6 144,761 - -0.6 144,761 - -0.2 144,869 - +0.6 144,885 - -0.9 144,949 - -0.2 144,949 - +0.1 144,956 + -0.3 144,964 + +0.1 144,988 - -0.6 145,037 + +0.5 145,258 + Dshi_0145 0.18 -0.5 145,260 - Dshi_0145 0.18 -0.6 145,316 + Dshi_0145 0.23 -0.9 145,364 + +1.5 145,412 - Dshi_0145 0.31 -0.3 145,522 + Dshi_0145 0.41 +0.1 145,726 + Dshi_0145 0.58 -0.6
Or see this region's nucleotide sequence