Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27460 and BWI76_RS27465 are separated by 108 nucleotides BWI76_RS27465 and BWI76_RS27470 are separated by 109 nucleotides BWI76_RS27470 and BWI76_RS27475 are separated by 98 nucleotides BWI76_RS27475 and BWI76_RS27480 are separated by 62 nucleotides
BWI76_RS27460: BWI76_RS27460 - hypothetical protein, at 5,697,293 to 5,697,892
_RS27460
BWI76_RS27465: BWI76_RS27465 - triose-phosphate isomerase, at 5,698,001 to 5,698,768
_RS27465
BWI76_RS27470: BWI76_RS27470 - sodium:sulfate symporter family protein, at 5,698,878 to 5,700,182
_RS27470
BWI76_RS27475: BWI76_RS27475 - regulatory protein GntR family protein, at 5,700,281 to 5,701,003
_RS27475
BWI76_RS27480: BWI76_RS27480 - hypothetical protein, at 5,701,066 to 5,702,106
_RS27480
Position (kb)
5698
5699
5700
5701 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 5697.921 kb on + strand at 5697.921 kb on + strand at 5697.929 kb on + strand at 5697.941 kb on + strand at 5697.943 kb on + strand at 5698.773 kb on + strand at 5698.902 kb on - strand at 5698.954 kb on + strand at 5699.039 kb on + strand, within BWI76_RS27470 at 5699.065 kb on - strand, within BWI76_RS27470 at 5699.121 kb on + strand, within BWI76_RS27470 at 5699.127 kb on - strand, within BWI76_RS27470 at 5699.407 kb on + strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.425 kb on - strand, within BWI76_RS27470 at 5699.566 kb on - strand, within BWI76_RS27470 at 5699.568 kb on + strand, within BWI76_RS27470 at 5699.581 kb on + strand, within BWI76_RS27470 at 5699.617 kb on + strand, within BWI76_RS27470 at 5699.853 kb on + strand, within BWI76_RS27470 at 5699.853 kb on + strand, within BWI76_RS27470 at 5699.866 kb on - strand, within BWI76_RS27470 at 5699.938 kb on - strand, within BWI76_RS27470 at 5700.093 kb on - strand at 5700.112 kb on + strand at 5700.153 kb on + strand at 5700.228 kb on + strand at 5700.279 kb on + strand at 5700.287 kb on - strand at 5700.342 kb on - strand at 5700.347 kb on + strand at 5700.424 kb on + strand, within BWI76_RS27475 at 5700.424 kb on + strand, within BWI76_RS27475 at 5700.424 kb on + strand, within BWI76_RS27475 at 5700.424 kb on + strand, within BWI76_RS27475 at 5700.424 kb on + strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.432 kb on - strand, within BWI76_RS27475 at 5700.435 kb on + strand, within BWI76_RS27475 at 5700.435 kb on + strand, within BWI76_RS27475 at 5700.479 kb on + strand, within BWI76_RS27475 at 5700.514 kb on + strand, within BWI76_RS27475 at 5700.514 kb on + strand, within BWI76_RS27475 at 5700.514 kb on + strand, within BWI76_RS27475 at 5700.514 kb on + strand, within BWI76_RS27475 at 5700.522 kb on - strand, within BWI76_RS27475 at 5700.522 kb on - strand, within BWI76_RS27475 at 5700.527 kb on - strand, within BWI76_RS27475 at 5700.637 kb on + strand, within BWI76_RS27475 at 5700.645 kb on - strand, within BWI76_RS27475 at 5700.780 kb on - strand, within BWI76_RS27475 at 5700.827 kb on + strand, within BWI76_RS27475 at 5700.835 kb on - strand, within BWI76_RS27475 at 5700.837 kb on + strand, within BWI76_RS27475 at 5700.877 kb on - strand, within BWI76_RS27475 at 5700.976 kb on + strand at 5701.012 kb on + strand at 5701.012 kb on + strand at 5701.012 kb on + strand at 5701.020 kb on - strand at 5701.020 kb on - strand at 5701.020 kb on - strand at 5701.020 kb on - strand at 5701.045 kb on + strand at 5701.055 kb on + strand at 5701.089 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,697,921 + +0.4 5,697,921 + +1.6 5,697,929 + -0.6 5,697,941 + +0.8 5,697,943 + +3.6 5,698,773 + -0.2 5,698,902 - -1.2 5,698,954 + +0.8 5,699,039 + BWI76_RS27470 0.12 +1.0 5,699,065 - BWI76_RS27470 0.14 -0.6 5,699,121 + BWI76_RS27470 0.19 +0.9 5,699,127 - BWI76_RS27470 0.19 -0.3 5,699,407 + BWI76_RS27470 0.41 -0.5 5,699,425 - BWI76_RS27470 0.42 +1.0 5,699,425 - BWI76_RS27470 0.42 +0.3 5,699,566 - BWI76_RS27470 0.53 +1.9 5,699,568 + BWI76_RS27470 0.53 +0.1 5,699,581 + BWI76_RS27470 0.54 -0.0 5,699,617 + BWI76_RS27470 0.57 -0.3 5,699,853 + BWI76_RS27470 0.75 -0.3 5,699,853 + BWI76_RS27470 0.75 -0.1 5,699,866 - BWI76_RS27470 0.76 -0.5 5,699,938 - BWI76_RS27470 0.81 -0.2 5,700,093 - +0.1 5,700,112 + +0.4 5,700,153 + -0.3 5,700,228 + +0.1 5,700,279 + -1.2 5,700,287 - -0.3 5,700,342 - -2.8 5,700,347 + -1.3 5,700,424 + BWI76_RS27475 0.20 +2.1 5,700,424 + BWI76_RS27475 0.20 -2.5 5,700,424 + BWI76_RS27475 0.20 -3.5 5,700,424 + BWI76_RS27475 0.20 +0.7 5,700,424 + BWI76_RS27475 0.20 -1.9 5,700,432 - BWI76_RS27475 0.21 -1.5 5,700,432 - BWI76_RS27475 0.21 -2.2 5,700,432 - BWI76_RS27475 0.21 -0.5 5,700,432 - BWI76_RS27475 0.21 -0.2 5,700,432 - BWI76_RS27475 0.21 -1.4 5,700,432 - BWI76_RS27475 0.21 +0.1 5,700,432 - BWI76_RS27475 0.21 -2.3 5,700,432 - BWI76_RS27475 0.21 -3.8 5,700,435 + BWI76_RS27475 0.21 -0.0 5,700,435 + BWI76_RS27475 0.21 -1.6 5,700,479 + BWI76_RS27475 0.27 -0.8 5,700,514 + BWI76_RS27475 0.32 -2.0 5,700,514 + BWI76_RS27475 0.32 -1.0 5,700,514 + BWI76_RS27475 0.32 -2.3 5,700,514 + BWI76_RS27475 0.32 -3.0 5,700,522 - BWI76_RS27475 0.33 -2.2 5,700,522 - BWI76_RS27475 0.33 -4.1 5,700,527 - BWI76_RS27475 0.34 -2.4 5,700,637 + BWI76_RS27475 0.49 +0.7 5,700,645 - BWI76_RS27475 0.50 -1.2 5,700,780 - BWI76_RS27475 0.69 -2.3 5,700,827 + BWI76_RS27475 0.76 -3.2 5,700,835 - BWI76_RS27475 0.77 -1.6 5,700,837 + BWI76_RS27475 0.77 -1.0 5,700,877 - BWI76_RS27475 0.82 -3.3 5,700,976 + -1.0 5,701,012 + -1.7 5,701,012 + +1.6 5,701,012 + -2.4 5,701,020 - -0.3 5,701,020 - +0.6 5,701,020 - -0.7 5,701,020 - -0.3 5,701,045 + -1.2 5,701,055 + -2.0 5,701,089 + -0.7
Or see this region's nucleotide sequence