Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19460 and BWI76_RS19465 are separated by 110 nucleotides BWI76_RS19465 and BWI76_RS19470 are separated by 53 nucleotides BWI76_RS19470 and BWI76_RS19475 overlap by 7 nucleotides
BWI76_RS19460: BWI76_RS19460 - lipoprotein, at 4,067,651 to 4,068,112
_RS19460
BWI76_RS19465: BWI76_RS19465 - hypothetical protein, at 4,068,223 to 4,068,690
_RS19465
BWI76_RS19470: BWI76_RS19470 - DNA-binding response regulator, at 4,068,744 to 4,069,463
_RS19470
BWI76_RS19475: BWI76_RS19475 - signal transduction histidine kinase, at 4,069,457 to 4,071,145
_RS19475
Position (kb) 4068
4069
4070 Strain fitness (log2 ratio) -1
0
1
2 at 4067.766 kb on - strand, within BWI76_RS19460 at 4067.785 kb on - strand, within BWI76_RS19460 at 4067.824 kb on + strand, within BWI76_RS19460 at 4067.911 kb on - strand, within BWI76_RS19460 at 4068.120 kb on - strand at 4068.441 kb on - strand, within BWI76_RS19465 at 4068.528 kb on + strand, within BWI76_RS19465 at 4068.530 kb on - strand, within BWI76_RS19465 at 4068.653 kb on + strand at 4069.303 kb on + strand, within BWI76_RS19470 at 4069.528 kb on - strand at 4069.690 kb on + strand, within BWI76_RS19475 at 4069.768 kb on + strand, within BWI76_RS19475 at 4070.172 kb on - strand, within BWI76_RS19475 at 4070.380 kb on - strand, within BWI76_RS19475
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 4,067,766 - BWI76_RS19460 0.25 -1.0 4,067,785 - BWI76_RS19460 0.29 +0.6 4,067,824 + BWI76_RS19460 0.37 +0.9 4,067,911 - BWI76_RS19460 0.56 +1.1 4,068,120 - +0.6 4,068,441 - BWI76_RS19465 0.47 -1.2 4,068,528 + BWI76_RS19465 0.65 +1.0 4,068,530 - BWI76_RS19465 0.66 +1.0 4,068,653 + -0.6 4,069,303 + BWI76_RS19470 0.78 +1.0 4,069,528 - -0.5 4,069,690 + BWI76_RS19475 0.14 -1.5 4,069,768 + BWI76_RS19475 0.18 +0.3 4,070,172 - BWI76_RS19475 0.42 +1.9 4,070,380 - BWI76_RS19475 0.55 -0.2
Or see this region's nucleotide sequence