Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09325 and BWI76_RS09330 are separated by 68 nucleotides BWI76_RS09330 and BWI76_RS09335 overlap by 4 nucleotides BWI76_RS09335 and BWI76_RS09340 overlap by 14 nucleotides BWI76_RS09340 and BWI76_RS09345 overlap by 11 nucleotides
BWI76_RS09325: BWI76_RS09325 - putative bacteriophage tail completion protein, at 1,958,420 to 1,958,866
_RS09325
BWI76_RS09330: BWI76_RS09330 - baseplate assembly protein V, at 1,958,935 to 1,959,507
_RS09330
BWI76_RS09335: BWI76_RS09335 - baseplate assembly protein W, at 1,959,504 to 1,959,866
_RS09335
BWI76_RS09340: BWI76_RS09340 - baseplate assembly protein J, at 1,959,853 to 1,960,761
_RS09340
BWI76_RS09345: BWI76_RS09345 - phage tail protein I, at 1,960,751 to 1,961,359
_RS09345
Position (kb) 1959
1960 Strain fitness (log2 ratio) -1
0
1 at 1958.602 kb on + strand, within BWI76_RS09325 at 1958.769 kb on + strand, within BWI76_RS09325 at 1959.352 kb on + strand, within BWI76_RS09330 at 1959.433 kb on + strand, within BWI76_RS09330 at 1959.775 kb on + strand, within BWI76_RS09335 at 1959.901 kb on - strand at 1960.048 kb on - strand, within BWI76_RS09340 at 1960.156 kb on + strand, within BWI76_RS09340 at 1960.366 kb on + strand, within BWI76_RS09340 at 1960.416 kb on + strand, within BWI76_RS09340 at 1960.429 kb on - strand, within BWI76_RS09340 at 1960.434 kb on - strand, within BWI76_RS09340 at 1960.554 kb on - strand, within BWI76_RS09340 at 1960.618 kb on - strand, within BWI76_RS09340 at 1960.701 kb on - strand at 1960.815 kb on - strand, within BWI76_RS09345
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 1,958,602 + BWI76_RS09325 0.41 -1.3 1,958,769 + BWI76_RS09325 0.78 -0.1 1,959,352 + BWI76_RS09330 0.73 -0.1 1,959,433 + BWI76_RS09330 0.87 +1.0 1,959,775 + BWI76_RS09335 0.75 +0.6 1,959,901 - +0.7 1,960,048 - BWI76_RS09340 0.21 -0.2 1,960,156 + BWI76_RS09340 0.33 -0.2 1,960,366 + BWI76_RS09340 0.56 +0.3 1,960,416 + BWI76_RS09340 0.62 +1.1 1,960,429 - BWI76_RS09340 0.63 +0.8 1,960,434 - BWI76_RS09340 0.64 -1.1 1,960,554 - BWI76_RS09340 0.77 -0.3 1,960,618 - BWI76_RS09340 0.84 -0.7 1,960,701 - +0.0 1,960,815 - BWI76_RS09345 0.11 -0.4
Or see this region's nucleotide sequence