Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01780 and BWI76_RS01785 are separated by 5 nucleotides BWI76_RS01785 and BWI76_RS01790 are separated by 38 nucleotides
BWI76_RS01780: BWI76_RS01780 - SPFH domain / Band 7 family protein, at 363,171 to 364,298
_RS01780
BWI76_RS01785: BWI76_RS01785 - nucleotidyltransferase, at 364,304 to 365,092
_RS01785
BWI76_RS01790: BWI76_RS01790 - lysine-sensitive aspartokinase 3, at 365,131 to 366,480
_RS01790
Position (kb) 364
365
366 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 363.374 kb on + strand, within BWI76_RS01780 at 363.377 kb on - strand, within BWI76_RS01780 at 363.419 kb on - strand, within BWI76_RS01780 at 363.521 kb on + strand, within BWI76_RS01780 at 363.617 kb on + strand, within BWI76_RS01780 at 363.635 kb on + strand, within BWI76_RS01780 at 363.974 kb on + strand, within BWI76_RS01780 at 364.030 kb on + strand, within BWI76_RS01780 at 364.049 kb on + strand, within BWI76_RS01780 at 364.122 kb on - strand, within BWI76_RS01780 at 364.145 kb on + strand, within BWI76_RS01780 at 364.211 kb on + strand at 364.216 kb on + strand at 364.216 kb on + strand at 364.454 kb on - strand, within BWI76_RS01785 at 364.515 kb on + strand, within BWI76_RS01785 at 364.854 kb on + strand, within BWI76_RS01785 at 364.923 kb on - strand, within BWI76_RS01785 at 364.928 kb on - strand, within BWI76_RS01785 at 364.986 kb on + strand, within BWI76_RS01785 at 364.996 kb on + strand, within BWI76_RS01785 at 365.004 kb on - strand, within BWI76_RS01785 at 365.065 kb on + strand at 365.273 kb on - strand, within BWI76_RS01790 at 365.344 kb on - strand, within BWI76_RS01790 at 365.381 kb on - strand, within BWI76_RS01790 at 365.450 kb on - strand, within BWI76_RS01790 at 365.481 kb on - strand, within BWI76_RS01790 at 365.539 kb on + strand, within BWI76_RS01790 at 365.547 kb on - strand, within BWI76_RS01790 at 365.661 kb on + strand, within BWI76_RS01790 at 365.689 kb on - strand, within BWI76_RS01790 at 365.694 kb on - strand, within BWI76_RS01790 at 365.790 kb on + strand, within BWI76_RS01790 at 365.860 kb on - strand, within BWI76_RS01790 at 365.908 kb on + strand, within BWI76_RS01790 at 365.916 kb on - strand, within BWI76_RS01790 at 365.916 kb on - strand, within BWI76_RS01790
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 363,374 + BWI76_RS01780 0.18 +1.6 363,377 - BWI76_RS01780 0.18 +2.3 363,419 - BWI76_RS01780 0.22 -1.1 363,521 + BWI76_RS01780 0.31 -0.7 363,617 + BWI76_RS01780 0.40 -0.5 363,635 + BWI76_RS01780 0.41 -0.2 363,974 + BWI76_RS01780 0.71 +1.0 364,030 + BWI76_RS01780 0.76 +1.3 364,049 + BWI76_RS01780 0.78 -3.2 364,122 - BWI76_RS01780 0.84 -1.4 364,145 + BWI76_RS01780 0.86 -1.2 364,211 + +0.7 364,216 + +0.9 364,216 + +0.6 364,454 - BWI76_RS01785 0.19 -1.5 364,515 + BWI76_RS01785 0.27 -0.3 364,854 + BWI76_RS01785 0.70 -1.6 364,923 - BWI76_RS01785 0.78 -0.4 364,928 - BWI76_RS01785 0.79 -0.5 364,986 + BWI76_RS01785 0.86 -0.2 364,996 + BWI76_RS01785 0.88 -0.7 365,004 - BWI76_RS01785 0.89 -1.0 365,065 + +0.4 365,273 - BWI76_RS01790 0.11 -0.2 365,344 - BWI76_RS01790 0.16 -0.0 365,381 - BWI76_RS01790 0.19 +0.2 365,450 - BWI76_RS01790 0.24 +0.3 365,481 - BWI76_RS01790 0.26 +0.6 365,539 + BWI76_RS01790 0.30 +0.5 365,547 - BWI76_RS01790 0.31 +0.1 365,661 + BWI76_RS01790 0.39 +0.6 365,689 - BWI76_RS01790 0.41 +0.3 365,694 - BWI76_RS01790 0.42 -0.2 365,790 + BWI76_RS01790 0.49 +0.4 365,860 - BWI76_RS01790 0.54 +2.1 365,908 + BWI76_RS01790 0.58 +1.2 365,916 - BWI76_RS01790 0.58 -0.8 365,916 - BWI76_RS01790 0.58 +0.9
Or see this region's nucleotide sequence