Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15020

Experiment: Lomefloxacin 0.0005 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.0005 mM
3,394,616	+		AO356_15010	0.87	+1.6
3,394,697	+				-0.5
3,394,697	+				-0.5
3,394,697	+				-2.5
3,394,698	-				-0.3
3,394,698	-				-1.2
3,394,715	+				-1.5
3,394,748	+				-2.5
3,394,749	-				+2.2
3,394,757	+				-0.8
3,394,757	+				+0.5
3,394,925	+		AO356_15015	0.16	-0.5
3,394,925	+		AO356_15015	0.16	-2.1
3,394,925	+		AO356_15015	0.16	-0.7
3,394,926	-		AO356_15015	0.16	+0.0
3,394,926	-		AO356_15015	0.16	-0.9
3,394,926	-		AO356_15015	0.16	-0.3
3,395,006	-		AO356_15015	0.28	-1.0
3,395,105	-		AO356_15015	0.43	-0.1
3,395,188	+		AO356_15015	0.56	-0.9
3,395,320	+		AO356_15015	0.76	-2.0
3,395,320	+		AO356_15015	0.76	-1.5
3,395,321	-		AO356_15015	0.76	+0.2
3,395,329	+		AO356_15015	0.77	-1.4
3,395,329	+		AO356_15015	0.77	-0.9
3,395,330	-		AO356_15015	0.77	+0.1
3,395,343	+		AO356_15015	0.79	-0.8
3,395,343	+		AO356_15015	0.79	-0.1
3,395,343	+		AO356_15015	0.79	-0.2
3,395,343	+		AO356_15015	0.79	-0.1
3,395,343	+		AO356_15015	0.79	+0.8
3,395,343	+		AO356_15015	0.79	-2.2
3,395,343	+		AO356_15015	0.79	+0.2
3,395,343	+		AO356_15015	0.79	+0.2
3,395,344	-		AO356_15015	0.80	+0.7
3,395,344	-		AO356_15015	0.80	-0.7
3,395,344	-		AO356_15015	0.80	-0.5
3,395,344	-		AO356_15015	0.80	-0.4
3,395,344	-		AO356_15015	0.80	-1.2
3,395,344	-		AO356_15015	0.80	+0.8
3,395,344	-		AO356_15015	0.80	+0.8
3,395,344	-		AO356_15015	0.80	-2.0
3,395,344	-		AO356_15015	0.80	-0.1
3,395,352	+		AO356_15015	0.81	+0.0
3,395,703	+				+0.4
3,395,832	+				+0.6
3,395,832	+				-0.8
3,395,833	-				+1.9
3,395,833	-				-0.5
3,395,833	-				-0.8
3,395,889	+				+0.3
3,395,890	-				+0.0
3,395,890	-				-0.6
3,395,964	+		AO356_15020	0.10	+0.5
3,395,964	+		AO356_15020	0.10	-0.9
3,395,965	-		AO356_15020	0.10	+1.0
3,395,965	-		AO356_15020	0.10	+0.3
3,395,965	-		AO356_15020	0.10	+0.3
3,396,120	+		AO356_15020	0.14	-0.5
3,396,120	+		AO356_15020	0.14	+0.5
3,396,121	-		AO356_15020	0.14	+0.6
3,396,153	+		AO356_15020	0.15	-1.8
3,396,154	-		AO356_15020	0.15	-0.9
3,396,154	-		AO356_15020	0.15	+0.6
3,396,154	-		AO356_15020	0.15	+0.2
3,396,154	-		AO356_15020	0.15	-2.5
3,396,154	-		AO356_15020	0.15	-0.2
3,396,424	+		AO356_15020	0.21	+0.8
3,396,444	+		AO356_15020	0.21	-0.5
3,396,447	+		AO356_15020	0.21	-0.1
3,396,448	-		AO356_15020	0.21	-1.7
3,396,463	-		AO356_15020	0.21	-0.7
3,396,477	+		AO356_15020	0.22	+0.5
3,396,477	+		AO356_15020	0.22	+1.6
3,396,478	-		AO356_15020	0.22	-0.4
3,396,708	+		AO356_15020	0.27	-2.8
3,396,727	-		AO356_15020	0.27	+0.3
3,396,727	-		AO356_15020	0.27	-0.4
3,396,742	-		AO356_15020	0.27	-1.0
3,396,742	-		AO356_15020	0.27	+0.9
3,396,769	-		AO356_15020	0.28	+1.6
3,396,769	-		AO356_15020	0.28	-1.5
3,396,769	-		AO356_15020	0.28	+0.1
3,396,859	-		AO356_15020	0.30	-0.2
3,396,945	+		AO356_15020	0.32	-0.5
3,396,945	+		AO356_15020	0.32	-1.2
3,396,946	-		AO356_15020	0.32	-2.4
3,396,946	-		AO356_15020	0.32	-0.0
3,397,191	+		AO356_15020	0.37	-1.6
3,397,191	+		AO356_15020	0.37	-1.0
3,397,242	+		AO356_15020	0.38	-2.7
3,397,242	+		AO356_15020	0.38	-1.5
3,397,242	+		AO356_15020	0.38	+0.1
3,397,243	-		AO356_15020	0.38	-1.2
3,397,243	-		AO356_15020	0.38	-0.5
3,397,243	-		AO356_15020	0.38	-0.9
3,397,338	+		AO356_15020	0.41	+0.6
3,397,338	+		AO356_15020	0.41	+0.6
3,397,338	+		AO356_15020	0.41	+0.3
3,397,339	-		AO356_15020	0.41	-0.2
3,397,458	+		AO356_15020	0.43	-0.2
3,397,458	+		AO356_15020	0.43	-0.9
3,397,458	+		AO356_15020	0.43	-0.0
3,397,638	-		AO356_15020	0.47	+0.1
3,397,638	-		AO356_15020	0.47	-0.3
3,397,672	-		AO356_15020	0.48	-0.8
3,397,672	-		AO356_15020	0.48	-0.3
3,397,672	-		AO356_15020	0.48	-0.3
3,397,672	-		AO356_15020	0.48	-1.0
3,397,672	-		AO356_15020	0.48	+0.5
3,397,672	-		AO356_15020	0.48	-0.0
3,397,672	-		AO356_15020	0.48	-1.7
3,397,690	-		AO356_15020	0.48	-2.3
3,397,690	-		AO356_15020	0.48	-0.5
3,397,765	-		AO356_15020	0.50	+0.4
3,397,863	+		AO356_15020	0.52	+0.2
3,397,863	+		AO356_15020	0.52	-0.8
3,397,863	+		AO356_15020	0.52	+0.0
3,397,864	-		AO356_15020	0.52	-0.5
3,397,864	-		AO356_15020	0.52	-2.1
3,397,864	-		AO356_15020	0.52	-1.1
3,397,864	-		AO356_15020	0.52	+0.6
3,397,864	-		AO356_15020	0.52	+0.6
3,397,864	-		AO356_15020	0.52	+0.3
3,397,864	-		AO356_15020	0.52	+0.1
3,397,909	-		AO356_15020	0.53	-1.4
3,397,909	-		AO356_15020	0.53	+0.1
3,397,909	-		AO356_15020	0.53	-0.7
3,397,909	-		AO356_15020	0.53	+0.6
3,397,962	+		AO356_15020	0.54	-0.0
3,397,962	+		AO356_15020	0.54	+0.4
3,397,963	-		AO356_15020	0.54	+0.7
3,397,963	-		AO356_15020	0.54	-0.8
3,398,230	-		AO356_15020	0.60	-1.4
3,398,230	-		AO356_15020	0.60	-1.3
3,398,230	-		AO356_15020	0.60	-3.0
3,398,340	+		AO356_15020	0.63	-1.9
3,398,391	+		AO356_15020	0.64	-0.3
3,398,391	+		AO356_15020	0.64	-1.7
3,398,856	+		AO356_15020	0.74	-0.9
3,398,856	+		AO356_15020	0.74	+0.6
3,398,857	-		AO356_15020	0.74	-0.6
3,398,857	-		AO356_15020	0.74	-2.2
3,398,862	+		AO356_15020	0.74	-2.4
3,398,862	+		AO356_15020	0.74	-0.6
3,398,862	+		AO356_15020	0.74	+0.5
3,398,862	+		AO356_15020	0.74	-0.0
3,398,863	-		AO356_15020	0.74	-0.1
3,398,865	+		AO356_15020	0.74	+0.6
3,398,866	-		AO356_15020	0.74	-0.4
3,398,940	+		AO356_15020	0.76	+1.1
3,398,941	-		AO356_15020	0.76	+0.9
3,398,960	+		AO356_15020	0.76	-0.0
3,399,117	+		AO356_15020	0.80	-0.7
3,399,117	+		AO356_15020	0.80	+0.3
3,399,117	+		AO356_15020	0.80	-2.2
3,399,117	+		AO356_15020	0.80	+0.3
3,399,117	+		AO356_15020	0.80	-1.2
3,399,118	-		AO356_15020	0.80	-0.2
3,399,118	-		AO356_15020	0.80	-0.4
3,399,118	-		AO356_15020	0.80	+0.2
3,399,118	-		AO356_15020	0.80	+2.9
3,399,468	+		AO356_15020	0.87	-0.7
3,399,690	+				+0.5
3,399,690	+				+0.9
3,399,874	-				-0.8
3,399,981	+				+0.5
3,399,982	-				-0.6
3,399,982	-				+0.3
3,400,231	+		AO356_15025	0.11	-0.1
3,400,232	-		AO356_15025	0.12	-0.4
3,400,270	+		AO356_15025	0.14	-2.2
3,400,270	+		AO356_15025	0.14	-1.8
3,400,270	+		AO356_15025	0.14	-1.5
3,400,270	+		AO356_15025	0.14	-0.0
3,400,271	-		AO356_15025	0.14	-2.1
3,400,271	-		AO356_15025	0.14	-0.2
3,400,303	+		AO356_15025	0.16	-0.7
3,400,303	+		AO356_15025	0.16	-1.6
3,400,303	+		AO356_15025	0.16	-0.8
3,400,303	+		AO356_15025	0.16	-0.6
3,400,303	+		AO356_15025	0.16	-0.3
3,400,304	-		AO356_15025	0.16	+1.6
3,400,304	-		AO356_15025	0.16	-0.2
3,400,304	-		AO356_15025	0.16	+0.5
3,400,304	-		AO356_15025	0.16	-2.4
3,400,367	-		AO356_15025	0.20	-1.8
3,400,367	-		AO356_15025	0.20	-1.3
3,400,414	+		AO356_15025	0.23	-0.7
3,400,888	+		AO356_15025	0.52	-0.2
3,400,990	+		AO356_15025	0.58	-0.4
3,400,990	+		AO356_15025	0.58	-1.7
3,400,990	+		AO356_15025	0.58	-1.1
3,400,990	+		AO356_15025	0.58	-0.8
3,400,991	-		AO356_15025	0.58	-0.4
3,400,991	-		AO356_15025	0.58	-0.6