Experiment: Lomefloxacin 0.0005 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08785 and AO356_08790 are separated by 99 nucleotides AO356_08790 and AO356_08795 overlap by 10 nucleotides
AO356_08785: AO356_08785 - serine/threonine protein phosphatase, at 1,980,731 to 1,981,546
_08785
AO356_08790: AO356_08790 - cytoplasmic protein, at 1,981,646 to 1,982,098
_08790
AO356_08795: AO356_08795 - ADP-ribose pyrophosphatase, at 1,982,089 to 1,982,706
_08795
Position (kb)
1980
1981
1982 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1979.766 kb on + strand at 1979.766 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.772 kb on + strand at 1979.799 kb on - strand at 1979.799 kb on - strand at 1979.801 kb on - strand at 1979.801 kb on - strand at 1979.801 kb on - strand at 1979.801 kb on - strand at 1980.014 kb on - strand at 1980.084 kb on + strand at 1980.089 kb on - strand at 1980.089 kb on - strand at 1980.089 kb on - strand at 1980.089 kb on - strand at 1980.145 kb on + strand at 1980.145 kb on + strand at 1980.145 kb on + strand at 1980.147 kb on + strand at 1980.147 kb on + strand at 1980.147 kb on + strand at 1980.361 kb on + strand at 1980.361 kb on + strand at 1980.361 kb on + strand at 1980.361 kb on + strand at 1980.388 kb on + strand at 1980.750 kb on + strand at 1980.750 kb on + strand at 1980.750 kb on + strand at 1980.750 kb on + strand at 1980.750 kb on + strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1980.751 kb on - strand at 1981.535 kb on + strand at 1981.535 kb on + strand at 1981.536 kb on - strand at 1981.593 kb on + strand at 1981.593 kb on + strand at 1981.594 kb on - strand at 1981.594 kb on - strand at 1981.594 kb on - strand at 1981.647 kb on + strand at 1981.647 kb on + strand at 1981.648 kb on - strand at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.764 kb on + strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.765 kb on - strand, within AO356_08790 at 1981.827 kb on + strand, within AO356_08790 at 1981.902 kb on + strand, within AO356_08790 at 1981.902 kb on + strand, within AO356_08790 at 1981.902 kb on + strand, within AO356_08790 at 1981.902 kb on + strand, within AO356_08790 at 1981.902 kb on + strand, within AO356_08790 at 1981.903 kb on - strand, within AO356_08790 at 1981.903 kb on - strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.025 kb on + strand, within AO356_08790 at 1982.026 kb on - strand, within AO356_08790 at 1982.026 kb on - strand, within AO356_08790 at 1982.098 kb on + strand at 1982.099 kb on - strand at 1982.166 kb on + strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.167 kb on - strand, within AO356_08795 at 1982.296 kb on + strand, within AO356_08795 at 1982.330 kb on + strand, within AO356_08795 at 1982.331 kb on - strand, within AO356_08795 at 1982.331 kb on - strand, within AO356_08795
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0005 mM remove 1,979,766 + -0.5 1,979,766 + -0.4 1,979,772 + +0.3 1,979,772 + +0.3 1,979,772 + +0.6 1,979,772 + -2.2 1,979,772 + +0.6 1,979,772 + -0.3 1,979,772 + -0.8 1,979,772 + +0.2 1,979,772 + +0.4 1,979,772 + -0.4 1,979,772 + -2.5 1,979,772 + +0.9 1,979,772 + -1.0 1,979,772 + -1.3 1,979,799 - -1.1 1,979,799 - -0.6 1,979,801 - -0.0 1,979,801 - +0.3 1,979,801 - -0.7 1,979,801 - -1.1 1,980,014 - +0.4 1,980,084 + -0.5 1,980,089 - -0.8 1,980,089 - -0.4 1,980,089 - -0.1 1,980,089 - -0.5 1,980,145 + -0.3 1,980,145 + -0.0 1,980,145 + -0.9 1,980,147 + -1.3 1,980,147 + +0.4 1,980,147 + -0.2 1,980,361 + -0.5 1,980,361 + -0.8 1,980,361 + -0.4 1,980,361 + +0.1 1,980,388 + -1.1 1,980,750 + -0.7 1,980,750 + -1.4 1,980,750 + -0.2 1,980,750 + -1.4 1,980,750 + -1.2 1,980,751 - +0.2 1,980,751 - +0.5 1,980,751 - -1.1 1,980,751 - -1.2 1,980,751 - +1.6 1,980,751 - -0.4 1,980,751 - -0.2 1,980,751 - -1.0 1,980,751 - -0.0 1,980,751 - -0.1 1,981,535 + -2.0 1,981,535 + +0.3 1,981,536 - -0.0 1,981,593 + -1.1 1,981,593 + -0.1 1,981,594 - -0.7 1,981,594 - -0.5 1,981,594 - -0.2 1,981,647 + -0.7 1,981,647 + +0.6 1,981,648 - -0.1 1,981,764 + AO356_08790 0.26 -0.4 1,981,764 + AO356_08790 0.26 -1.5 1,981,764 + AO356_08790 0.26 -0.4 1,981,764 + AO356_08790 0.26 -0.3 1,981,764 + AO356_08790 0.26 -0.5 1,981,764 + AO356_08790 0.26 +0.2 1,981,764 + AO356_08790 0.26 -1.2 1,981,764 + AO356_08790 0.26 -1.3 1,981,764 + AO356_08790 0.26 -1.2 1,981,764 + AO356_08790 0.26 +0.0 1,981,764 + AO356_08790 0.26 -0.0 1,981,764 + AO356_08790 0.26 +0.8 1,981,764 + AO356_08790 0.26 -1.7 1,981,765 - AO356_08790 0.26 -0.2 1,981,765 - AO356_08790 0.26 -0.6 1,981,765 - AO356_08790 0.26 -1.4 1,981,765 - AO356_08790 0.26 -1.0 1,981,765 - AO356_08790 0.26 -1.1 1,981,765 - AO356_08790 0.26 +0.2 1,981,765 - AO356_08790 0.26 -1.2 1,981,765 - AO356_08790 0.26 +0.3 1,981,765 - AO356_08790 0.26 -0.5 1,981,765 - AO356_08790 0.26 -0.6 1,981,765 - AO356_08790 0.26 -0.1 1,981,765 - AO356_08790 0.26 +0.1 1,981,827 + AO356_08790 0.40 -0.1 1,981,902 + AO356_08790 0.57 -1.7 1,981,902 + AO356_08790 0.57 -1.1 1,981,902 + AO356_08790 0.57 -1.3 1,981,902 + AO356_08790 0.57 -1.5 1,981,902 + AO356_08790 0.57 -0.7 1,981,903 - AO356_08790 0.57 -0.2 1,981,903 - AO356_08790 0.57 -0.7 1,982,025 + AO356_08790 0.84 +0.1 1,982,025 + AO356_08790 0.84 -0.8 1,982,025 + AO356_08790 0.84 -0.6 1,982,025 + AO356_08790 0.84 -0.2 1,982,025 + AO356_08790 0.84 -0.3 1,982,025 + AO356_08790 0.84 +1.1 1,982,026 - AO356_08790 0.84 +0.4 1,982,026 - AO356_08790 0.84 -1.0 1,982,098 + +0.9 1,982,099 - -2.1 1,982,166 + AO356_08795 0.12 -1.0 1,982,167 - AO356_08795 0.13 -0.5 1,982,167 - AO356_08795 0.13 -1.8 1,982,167 - AO356_08795 0.13 -2.3 1,982,167 - AO356_08795 0.13 -0.2 1,982,167 - AO356_08795 0.13 +2.4 1,982,167 - AO356_08795 0.13 -0.1 1,982,167 - AO356_08795 0.13 -0.2 1,982,167 - AO356_08795 0.13 -1.8 1,982,296 + AO356_08795 0.33 -1.8 1,982,330 + AO356_08795 0.39 +1.4 1,982,331 - AO356_08795 0.39 +0.4 1,982,331 - AO356_08795 0.39 -0.7
Or see this region's nucleotide sequence