Experiment: Lomefloxacin 0.0005 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01915 and AO356_01925 are separated by 955 nucleotides AO356_01925 and AO356_01930 are separated by 15 nucleotides AO356_01930 and AO356_01935 overlap by 10 nucleotides
AO356_01915: AO356_01915 - hypothetical protein, at 426,312 to 426,587
_01915
AO356_01925: AO356_01925 - hypothetical protein, at 427,543 to 427,905
_01925
AO356_01930: AO356_01930 - hypothetical protein, at 427,921 to 428,799
_01930
AO356_01935: AO356_01935 - biotin synthase, at 428,790 to 430,010
_01935
Position (kb) 427
428 Strain fitness (log2 ratio) -2
-1
0
1
2 at 426.566 kb on + strand at 426.567 kb on - strand at 426.569 kb on + strand at 426.570 kb on - strand at 426.577 kb on + strand at 426.577 kb on + strand at 426.577 kb on + strand at 426.578 kb on - strand at 426.578 kb on - strand at 426.596 kb on - strand at 426.704 kb on + strand at 426.772 kb on + strand at 426.773 kb on - strand at 426.773 kb on - strand at 426.773 kb on - strand at 426.773 kb on - strand at 426.776 kb on + strand at 426.776 kb on + strand at 426.776 kb on + strand at 426.776 kb on + strand at 426.776 kb on + strand at 426.777 kb on - strand at 426.777 kb on - strand at 426.777 kb on - strand at 426.777 kb on - strand at 426.777 kb on - strand at 426.777 kb on - strand at 426.781 kb on + strand at 426.781 kb on + strand at 426.782 kb on - strand at 426.782 kb on - strand at 426.785 kb on + strand at 426.785 kb on + strand at 426.785 kb on + strand at 426.786 kb on - strand at 426.786 kb on - strand at 426.786 kb on - strand at 426.830 kb on - strand at 426.855 kb on + strand at 426.856 kb on - strand at 426.856 kb on - strand at 426.856 kb on - strand at 426.897 kb on + strand at 426.903 kb on - strand at 426.914 kb on + strand at 426.914 kb on + strand at 426.934 kb on + strand at 426.939 kb on + strand at 426.939 kb on + strand at 426.955 kb on + strand at 426.955 kb on + strand at 427.013 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.029 kb on + strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.030 kb on - strand at 427.159 kb on + strand at 427.159 kb on + strand at 427.159 kb on + strand at 427.183 kb on + strand at 427.184 kb on - strand at 427.245 kb on - strand at 427.251 kb on - strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.286 kb on + strand at 427.287 kb on - strand at 427.287 kb on - strand at 427.309 kb on + strand at 427.414 kb on - strand at 427.442 kb on + strand at 427.442 kb on + strand at 427.443 kb on - strand at 427.443 kb on - strand at 427.443 kb on - strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.456 kb on + strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.457 kb on - strand at 427.462 kb on + strand at 427.463 kb on - strand at 427.463 kb on - strand at 427.488 kb on + strand at 427.502 kb on + strand at 427.502 kb on + strand at 427.520 kb on + strand at 427.556 kb on - strand at 427.674 kb on + strand, within AO356_01925 at 427.703 kb on + strand, within AO356_01925 at 427.721 kb on + strand, within AO356_01925 at 427.721 kb on + strand, within AO356_01925 at 427.777 kb on - strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.783 kb on + strand, within AO356_01925 at 427.795 kb on - strand, within AO356_01925 at 427.901 kb on + strand at 427.902 kb on - strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.922 kb on + strand at 427.946 kb on - strand at 427.975 kb on - strand at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.156 kb on + strand, within AO356_01930 at 428.159 kb on + strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.160 kb on - strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.549 kb on + strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930 at 428.550 kb on - strand, within AO356_01930
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0005 mM remove 426,566 + -0.3 426,567 - +0.1 426,569 + -0.5 426,570 - -0.7 426,577 + +0.5 426,577 + -0.1 426,577 + +1.2 426,578 - +0.2 426,578 - -0.3 426,596 - +0.5 426,704 + -0.2 426,772 + -0.0 426,773 - +0.9 426,773 - +1.2 426,773 - +1.2 426,773 - +0.8 426,776 + +0.1 426,776 + +0.5 426,776 + -0.7 426,776 + -0.2 426,776 + -0.0 426,777 - +0.5 426,777 - +0.0 426,777 - -1.1 426,777 - -0.5 426,777 - -0.5 426,777 - +0.4 426,781 + -0.7 426,781 + +0.4 426,782 - -1.1 426,782 - -0.8 426,785 + +1.6 426,785 + -0.1 426,785 + -2.1 426,786 - +0.7 426,786 - -0.6 426,786 - +0.3 426,830 - -2.0 426,855 + +0.6 426,856 - +0.3 426,856 - -0.2 426,856 - -0.2 426,897 + -0.7 426,903 - -2.0 426,914 + -0.6 426,914 + +1.1 426,934 + -0.2 426,939 + +0.8 426,939 + -0.7 426,955 + +0.8 426,955 + -1.0 427,013 + +0.7 427,029 + -0.6 427,029 + -0.7 427,029 + +0.7 427,029 + -1.8 427,029 + +0.7 427,030 - +2.0 427,030 - +0.8 427,030 - +0.9 427,030 - -0.4 427,030 - +0.7 427,030 - +1.6 427,030 - +0.6 427,030 - +0.1 427,159 + +1.3 427,159 + +0.3 427,159 + +0.7 427,183 + +1.0 427,184 - -0.5 427,245 - -0.8 427,251 - +0.8 427,286 + +0.3 427,286 + +0.9 427,286 + -0.3 427,286 + +0.5 427,287 - -0.7 427,287 - +0.5 427,309 + -1.2 427,414 - +0.8 427,442 + -0.2 427,442 + -1.6 427,443 - -0.5 427,443 - +0.0 427,443 - +1.6 427,456 + -0.9 427,456 + -1.9 427,456 + -1.1 427,456 + +0.2 427,456 + -0.1 427,456 + +0.8 427,456 + -1.0 427,456 + -0.1 427,456 + -0.5 427,456 + +0.4 427,456 + -1.5 427,457 - -0.2 427,457 - -1.9 427,457 - -0.5 427,457 - -0.1 427,457 - +0.2 427,457 - +0.4 427,457 - -0.4 427,457 - +0.3 427,457 - +0.7 427,462 + -1.8 427,463 - +0.3 427,463 - +0.9 427,488 + -0.2 427,502 + +0.3 427,502 + +1.2 427,520 + -1.2 427,556 - +2.5 427,674 + AO356_01925 0.36 -1.9 427,703 + AO356_01925 0.44 +0.9 427,721 + AO356_01925 0.49 -1.4 427,721 + AO356_01925 0.49 -0.7 427,777 - AO356_01925 0.64 -0.0 427,783 + AO356_01925 0.66 +1.2 427,783 + AO356_01925 0.66 +0.0 427,783 + AO356_01925 0.66 +0.0 427,783 + AO356_01925 0.66 -2.2 427,795 - AO356_01925 0.69 +0.5 427,901 + +1.5 427,902 - -0.0 427,922 + +0.2 427,922 + +0.8 427,922 + -2.0 427,922 + -0.5 427,946 - +0.0 427,975 - +1.1 428,156 + AO356_01930 0.27 +0.0 428,156 + AO356_01930 0.27 +0.4 428,156 + AO356_01930 0.27 +0.2 428,156 + AO356_01930 0.27 +0.0 428,156 + AO356_01930 0.27 +0.2 428,156 + AO356_01930 0.27 -1.0 428,156 + AO356_01930 0.27 +0.3 428,156 + AO356_01930 0.27 +0.7 428,159 + AO356_01930 0.27 +0.2 428,160 - AO356_01930 0.27 -0.6 428,160 - AO356_01930 0.27 +0.0 428,160 - AO356_01930 0.27 -0.2 428,160 - AO356_01930 0.27 -0.0 428,160 - AO356_01930 0.27 +1.4 428,549 + AO356_01930 0.71 +0.9 428,549 + AO356_01930 0.71 -0.3 428,549 + AO356_01930 0.71 -1.0 428,550 - AO356_01930 0.72 -0.4 428,550 - AO356_01930 0.72 +1.0 428,550 - AO356_01930 0.72 -1.4
Or see this region's nucleotide sequence