Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0770 and Dshi_0771 overlap by 43 nucleotides Dshi_0771 and Dshi_0772 overlap by 7 nucleotides Dshi_0772 and Dshi_0773 overlap by 4 nucleotides Dshi_0773 and Dshi_0774 are separated by 42 nucleotides
Dshi_0770: Dshi_0770 - arsenate reductase and related (RefSeq), at 776,635 to 776,946
_0770
Dshi_0771: Dshi_0771 - DoxX family protein (RefSeq), at 776,904 to 777,470
_0771
Dshi_0772: Dshi_0772 - hypothetical protein (RefSeq), at 777,464 to 778,210
_0772
Dshi_0773: Dshi_0773 - protein of unknown function DUF692 (RefSeq), at 778,207 to 779,157
_0773
Dshi_0774: Dshi_0774 - hypothetical protein (RefSeq), at 779,200 to 779,487
_0774
Position (kb) 777
778
779 Strain fitness (log2 ratio) -2
-1
0
1
2 at 776.498 kb on + strand at 776.535 kb on + strand at 776.578 kb on + strand at 776.593 kb on + strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.601 kb on - strand at 776.611 kb on - strand at 776.628 kb on + strand at 776.813 kb on + strand, within Dshi_0770 at 776.920 kb on - strand at 776.932 kb on - strand at 776.992 kb on + strand, within Dshi_0771 at 776.995 kb on - strand, within Dshi_0771 at 777.223 kb on + strand, within Dshi_0771 at 777.274 kb on - strand, within Dshi_0771 at 777.285 kb on + strand, within Dshi_0771 at 777.321 kb on + strand, within Dshi_0771 at 777.466 kb on + strand at 777.467 kb on + strand at 777.468 kb on + strand at 777.516 kb on + strand at 777.557 kb on + strand, within Dshi_0772 at 777.565 kb on - strand, within Dshi_0772 at 777.594 kb on + strand, within Dshi_0772 at 777.760 kb on + strand, within Dshi_0772 at 777.787 kb on + strand, within Dshi_0772 at 777.905 kb on - strand, within Dshi_0772 at 777.977 kb on - strand, within Dshi_0772 at 778.007 kb on + strand, within Dshi_0772 at 778.079 kb on - strand, within Dshi_0772 at 778.094 kb on - strand, within Dshi_0772 at 778.345 kb on + strand, within Dshi_0773 at 778.433 kb on + strand, within Dshi_0773 at 778.509 kb on - strand, within Dshi_0773 at 778.623 kb on + strand, within Dshi_0773 at 778.654 kb on + strand, within Dshi_0773 at 778.664 kb on + strand, within Dshi_0773 at 778.664 kb on + strand, within Dshi_0773 at 778.712 kb on + strand, within Dshi_0773 at 778.720 kb on - strand, within Dshi_0773 at 778.720 kb on - strand, within Dshi_0773 at 778.750 kb on + strand, within Dshi_0773 at 778.830 kb on + strand, within Dshi_0773 at 778.843 kb on - strand, within Dshi_0773 at 778.848 kb on - strand, within Dshi_0773 at 778.901 kb on + strand, within Dshi_0773 at 778.901 kb on + strand, within Dshi_0773 at 778.907 kb on + strand, within Dshi_0773
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 776,498 + +2.5 776,535 + -0.7 776,578 + +1.2 776,593 + -0.3 776,601 - -0.8 776,601 - -0.6 776,601 - +0.8 776,601 - -0.4 776,601 - -0.4 776,611 - -0.7 776,628 + -0.5 776,813 + Dshi_0770 0.57 -1.0 776,920 - -1.0 776,932 - -0.4 776,992 + Dshi_0771 0.16 -0.4 776,995 - Dshi_0771 0.16 -2.0 777,223 + Dshi_0771 0.56 -1.4 777,274 - Dshi_0771 0.65 -1.0 777,285 + Dshi_0771 0.67 +0.3 777,321 + Dshi_0771 0.74 +0.0 777,466 + -0.1 777,467 + +0.5 777,468 + -0.4 777,516 + +0.4 777,557 + Dshi_0772 0.12 -0.2 777,565 - Dshi_0772 0.14 -2.6 777,594 + Dshi_0772 0.17 -0.4 777,760 + Dshi_0772 0.40 -0.9 777,787 + Dshi_0772 0.43 +0.1 777,905 - Dshi_0772 0.59 -1.0 777,977 - Dshi_0772 0.69 -0.2 778,007 + Dshi_0772 0.73 -0.0 778,079 - Dshi_0772 0.82 -1.9 778,094 - Dshi_0772 0.84 -0.0 778,345 + Dshi_0773 0.15 -0.2 778,433 + Dshi_0773 0.24 -0.6 778,509 - Dshi_0773 0.32 -0.6 778,623 + Dshi_0773 0.44 -0.3 778,654 + Dshi_0773 0.47 -0.1 778,664 + Dshi_0773 0.48 +0.4 778,664 + Dshi_0773 0.48 +1.2 778,712 + Dshi_0773 0.53 -0.5 778,720 - Dshi_0773 0.54 -0.3 778,720 - Dshi_0773 0.54 -0.4 778,750 + Dshi_0773 0.57 -0.2 778,830 + Dshi_0773 0.66 +1.1 778,843 - Dshi_0773 0.67 +0.3 778,848 - Dshi_0773 0.67 -0.9 778,901 + Dshi_0773 0.73 -0.5 778,901 + Dshi_0773 0.73 -0.3 778,907 + Dshi_0773 0.74 -0.2
Or see this region's nucleotide sequence